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scnpilot_solids1_trim150_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_324_1

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3..203
DNA (201bp) protein (67aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BHQ1_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP48309.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
plasmid stabilization element ParE
scnpilot_solids1_trim150_scaffold_324_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(276..890)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Vibrio parahaemolyticus VPCR-2010 RepID=T5JII1_VIBPH
Tax=GWC2_Ignavibacteria_rel_36_12_curated
scnpilot_solids1_trim150_scaffold_324_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2105..3463
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B54FC
Amidohydrolase {ECO:0000313|EMBL:AHX15051.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
amidohydrolase, imidazolonepropionase
scnpilot_solids1_trim150_scaffold_324_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3584..4963
DNA (1380bp) protein (460aa)
Amidohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCL9_9GAMM
Amidohydrolase {ECO:0000313|EMBL:AHX15051.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
amidohydrolase, imidazolonepropionase
scnpilot_solids1_trim150_scaffold_324_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4989..5741
DNA (753bp) protein (251aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ57_9GAMM
ubiquinone/menaquinone biosynthesis methyltransferase
scnpilot_solids1_trim150_scaffold_324_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5885..6151
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCS1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97262.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_324_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6165..6779
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR16_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89657.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_324_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6920..8470
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030BE211
Peptidase S10 {ECO:0000313|EMBL:AIF46555.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
carboxypeptidase C (cathepsin A)
scnpilot_solids1_trim150_scaffold_324_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8506..10197
DNA (1692bp) protein (564aa)
acid phosphatase (EC:3.1.3.2)
Acid phosphatase {ECO:0000313|EMBL:AGG90634.1}; EC=3.1.3.2 {ECO:0000313|EMBL:AGG90634.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Acid phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIA9_9GAMM
scnpilot_solids1_trim150_scaffold_324_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10285..12090
DNA (1806bp) protein (602aa)
Aminopeptidase N n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCR0_9GAMM
Aminopeptidase N {ECO:0000313|EMBL:EIL97251.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aminopeptidase N
scnpilot_solids1_trim150_scaffold_324_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12347..12979
DNA (633bp) protein (211aa)
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS0_9GAMM
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL92011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids1_trim150_scaffold_324_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12976..13638
DNA (663bp) protein (221aa)
Anti-ECFsigma factor ChrR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR9_9GAMM
Anti-ECFsigma factor ChrR {ECO:0000313|EMBL:EIL92010.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
anti-ECFsigma factor, ChrR
scnpilot_solids1_trim150_scaffold_324_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13646..15082
DNA (1437bp) protein (479aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND67_9GAMM
deoxyribodipyrimidine photolyase
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AGG87383.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_324_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15167..16279
DNA (1113bp) protein (371aa)
Catalase-related peroxidase {ECO:0000256|PIRNR:PIRNR000296}; EC=1.11.1.- {ECO:0000256|PIRNR:PIRNR000296};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
catalase; K03781 catalase [EC:1.11.1.6]
Catalase-related peroxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXQ7_9GAMM
scnpilot_solids1_trim150_scaffold_324_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16276..16905
DNA (630bp) protein (210aa)
Cytochrome b561 protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXQ6_9GAMM
Cytochrome b561 protein {ECO:0000313|EMBL:EIL91997.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
yodB; cytochrome b561
scnpilot_solids1_trim150_scaffold_324_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17059..17559)
DNA (501bp) protein (167aa)
TspO and MBR like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR7_9GAMM
TspO and MBR like protein {ECO:0000313|EMBL:EIL92008.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tryptophan-rich sensory protein
scnpilot_solids1_trim150_scaffold_324_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17782..18765
DNA (984bp) protein (328aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHT1_9GAMM
fatty-acid desaturase
Fatty-acid desaturase {ECO:0000313|EMBL:AGG87381.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_324_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18769..20073
DNA (1305bp) protein (435aa)
Dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR4_9GAMM
Dehydrogenase {ECO:0000313|EMBL:EIL92005.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative NAD/FAD-binding protein
scnpilot_solids1_trim150_scaffold_324_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20064..20864
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX20_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87379.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_324_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20887..22182
DNA (1296bp) protein (432aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX19_9GAMM
methyltransferase, cyclopropane fatty acid synthase
Methyltransferase, cyclopropane fatty acid synthase {ECO:0000313|EMBL:AGG87378.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_324_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22179..22733
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92002.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2878)
scnpilot_solids1_trim150_scaffold_324_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22730..23512
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92001.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_324_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23509..24591
DNA (1083bp) protein (361aa)
Methyltransferase, cyclopropane fatty acid synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAA7_9GAMM
methyltransferase, cyclopropane fatty acid synthase
Methyltransferase, cyclopropane fatty acid synthase {ECO:0000313|EMBL:AGG87375.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_324_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24630..25181
DNA (552bp) protein (184aa)
Bacterial lipocalin n=1 Tax=Rhodanobacter denitrificans RepID=M4NAB4_9GAMM
bacterial lipocalin
Bacterial lipocalin {ECO:0000313|EMBL:AGG87374.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_324_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25445..26428
DNA (984bp) protein (328aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR63_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL89704.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids1_trim150_scaffold_324_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26550..27161
DNA (612bp) protein (204aa)
Putative Fa2h protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR64_9GAMM
sterol desaturase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_324_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27219..27989)
DNA (771bp) protein (257aa)
Putative metal-dependent hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W763_9GAMM
Putative metal-dependent hydrolase {ECO:0000313|EMBL:EIL95304.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative metal-dependent hydrolase
scnpilot_solids1_trim150_scaffold_324_28
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28134..29051)
DNA (918bp) protein (306aa)
Recombination-associated protein RdgC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCU7_9GAMM
DNA recombination-dependent growth factor C
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_324_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29161..30363)
DNA (1203bp) protein (401aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIB9_9GAMM
aspartate/tyrosine/aromatic aminotransferase
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:AGG90644.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_324_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30503..30709
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCU4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97285.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uncharacterized conserved small protein containing a coiled-coil domain
Displaying items 1-30 of 42 in total

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