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scnpilot_solids1_trim150_scaffold_431

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_431_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRN7_9GAMM
scnpilot_solids1_trim150_scaffold_431_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

844..1539
DNA (696bp) protein (232aa)
DNA-binding transcriptional dual regulator Crp n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1V1_9GAMM
DNA-binding transcriptional dual regulator Crp {ECO:0000313|EMBL:EIL93442.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cAMP-binding protein
scnpilot_solids1_trim150_scaffold_431_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1587..2282)
DNA (696bp) protein (232aa)
Phosphoserine phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW17_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90457.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_431_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2297..3091)
DNA (795bp) protein (265aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN66_9GAMM
scnpilot_solids1_trim150_scaffold_431_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3210..4259)
DNA (1050bp) protein (350aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anthranilate phosphoribosyltransferase n=1 Tax=Dyella japonica RepID=UPI0003010B3B
anthranilate phosphoribosyltransferase
scnpilot_solids1_trim150_scaffold_431_6
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4256..4852)
DNA (597bp) protein (199aa)
Anthranilate synthase component II {ECO:0000313|EMBL:AIF46787.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AIF46787.1};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anthranilate synthase subunit II n=1 Tax=Dyella japonica RepID=UPI000312A19C
glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
scnpilot_solids1_trim150_scaffold_431_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4940..6178)
DNA (1239bp) protein (413aa)
Sodium:dicarboxylate symporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRP6_9GAMM
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:EIL89887.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Na+/H+ dicarboxylate symporter
scnpilot_solids1_trim150_scaffold_431_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6372..8111
DNA (1740bp) protein (580aa)
Beta-lactamase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRQ5_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL89896.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
penicillin-binding protein, beta-lactamase class C
scnpilot_solids1_trim150_scaffold_431_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8133..9608)
DNA (1476bp) protein (492aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I {ECO:0000313|EMBL:AGG90492.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AGG90492.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Anthranilate synthase component I n=1 Tax=Rhodanobacter denitrificans RepID=I4WW49_9GAMM
scnpilot_solids1_trim150_scaffold_431_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9701..10276)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93471.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_431_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10318..10986)
DNA (669bp) protein (223aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHZ3_9GAMM
scnpilot_solids1_trim150_scaffold_431_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11087..11902)
DNA (816bp) protein (272aa)
Protein with DnaJ-like domain n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN99_9GAMM
protein with DnaJ-like domain
Protein with DnaJ-like domain {ECO:0000313|EMBL:AGG90500.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_431_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11899..12192)
DNA (294bp) protein (98aa)
Cytochrome c553 n=1 Tax=Rhodanobacter denitrificans RepID=I4WW55_9GAMM
cytochrome c553
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_431_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12215..13228
DNA (1014bp) protein (338aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y7_9GAMM
phosphoribosylaminoimidazole-succinocarboxamide synthase
scnpilot_solids1_trim150_scaffold_431_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13225..13557
DNA (333bp) protein (111aa)
Putative mebrane transport protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS7_9GAMM
Putative mebrane transport protein {ECO:0000313|EMBL:EIL89918.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
mebrane transport protein
scnpilot_solids1_trim150_scaffold_431_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13589..14059
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89919.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_431_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14056..14463
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y9_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_431_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14482..16689)
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW60_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90506.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_431_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16719..18068)
DNA (1350bp) protein (450aa)
Amino acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WW61_9GAMM
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AGG90507.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_431_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18302..19177
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDX6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97667.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_431_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19254..20345
DNA (1092bp) protein (364aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA polymerase IV n=1 Tax=Rhodanobacter denitrificans RepID=I4WW64_9GAMM
nucleotidyltransferase/DNA polymerase involved in DNA repair
scnpilot_solids1_trim150_scaffold_431_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20361..20987)
DNA (627bp) protein (209aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKC1_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG90512.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_431_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20997..21800)
DNA (804bp) protein (268aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDY4_9GAMM
scnpilot_solids1_trim150_scaffold_431_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21920..23725)
DNA (1806bp) protein (602aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W224_9GAMM
scnpilot_solids1_trim150_scaffold_431_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23749..24771)
DNA (1023bp) protein (341aa)
Mechanosensitive ion channel MscS n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHS3_9GAMM
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EIL99014.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
mechanosensitive ion channel MscS
scnpilot_solids1_trim150_scaffold_431_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24812..26197)
DNA (1386bp) protein (462aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Dihydrolipoamide acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W225_9GAMM
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
scnpilot_solids1_trim150_scaffold_431_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26470..27558)
DNA (1089bp) protein (363aa)
MscS mechanosensitive ion channel n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXG7_9GAMM
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EIL91908.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
mechanosensitive ion channel MscS
scnpilot_solids1_trim150_scaffold_431_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27871..28191)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR32_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89673.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Protein of unknown function (DUF2845)
scnpilot_solids1_trim150_scaffold_431_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28348..29112)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDK1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97542.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Protein of unknown function (DUF2884)
scnpilot_solids1_trim150_scaffold_431_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29189..29734)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDK2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97543.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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