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scnpilot_solids1_trim150_scaffold_510

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_510_1
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..2107)
DNA (1677bp) protein (559aa)
adenine-specific DNA-methyltransferase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YXF6_DESAF rbh
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:EGJ51733.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
scnpilot_solids1_trim150_scaffold_510_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2301..3116)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKJ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99984.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_510_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3147..4622)
DNA (1476bp) protein (492aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
Amidophosphoribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLM0_9GAMM
scnpilot_solids1_trim150_scaffold_510_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4677..5315)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95040.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative membrane protein, required for colicin V production
scnpilot_solids1_trim150_scaffold_510_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5358..6374)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLF5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88566.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_510_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6415..7734)
DNA (1320bp) protein (440aa)
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E7_9GAMM
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:EIL95038.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
folylpolyglutamate synthase/dihydrofolate synthase
scnpilot_solids1_trim150_scaffold_510_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8290..8724
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034831A0
Uncharacterized protein {ECO:0000313|EMBL:EIL91957.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_510_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8747..9682
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003459D21
Uncharacterized protein {ECO:0000313|EMBL:AHX14646.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
VirB8 protein; K03203 type IV secretion system protein VirB8
scnpilot_solids1_trim150_scaffold_510_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9679..10446
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344F3C5 rbh
Type IV secretion system protein Virb9 {ECO:0000313|EMBL:EIL91959.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
virB9; Type IV secretory pathway, VirB9 component rbh
scnpilot_solids1_trim150_scaffold_510_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10443..11636
DNA (1194bp) protein (398aa)
VirB10 protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXL9_9GAMM
VirB10 protein {ECO:0000313|EMBL:EIL91960.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
virB10; type IV secretion system channel component VirB4; K03195 type IV secretion system protein VirB10
scnpilot_solids1_trim150_scaffold_510_11
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11658..12749
DNA (1092bp) protein (364aa)
VirB11 protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXM0_9GAMM
Type IV secretion system energizing component VirB11 {ECO:0000313|EMBL:KJV26028.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
putative type IV secretion system conjugal transfer protein; K03196 type IV secretion system protein VirB11
scnpilot_solids1_trim150_scaffold_510_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12728..13609
DNA (882bp) protein (294aa)
Putative type IV secretion system conjugal protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXM1_9GAMM
Putative type IV secretion system conjugal protein {ECO:0000313|EMBL:EIL91962.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
VirB1 protein; K03194 type IV secretion system protein VirB1
scnpilot_solids1_trim150_scaffold_510_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13742..14149
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034780F2
Putative type IV secretion system protein {ECO:0000313|EMBL:EIL91963.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative type IV secretion system protein; K03197 type IV secretion system protein VirB2
scnpilot_solids1_trim150_scaffold_510_14
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

14184..14450
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346EAD1
Uncharacterized protein {ECO:0000313|EMBL:KIJ72227.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3); K03198 type IV secretion system protein VirB3
scnpilot_solids1_trim150_scaffold_510_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14499..16994
DNA (2496bp) protein (832aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344928B
Type IV secretion/conjugal transfer ATPase {ECO:0000313|EMBL:EIL91965.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
virB4; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4); K03199 type IV secretion system protein VirB4
scnpilot_solids1_trim150_scaffold_510_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17007..17783
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXM5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91966.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_510_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17841..18920
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346F8DE
VirB6 protein {ECO:0000313|EMBL:EIL91967.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
VirB6 protein; K03201 type IV secretion system protein VirB6 rbh
scnpilot_solids1_trim150_scaffold_510_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18933..19301
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXN0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91971.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_510_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19319..19636)
DNA (318bp) protein (106aa)
Putative NTP binding protein (Contains STAS domain) n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX9_9GAMM
putative NTP binding protein (contains STAS domain)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_510_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19633..20313)
DNA (681bp) protein (227aa)
Organic solvent resistance ABC transporter auxiliary protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRK1_9GAMM
ABC-type transport system involved in resistance to organic solvents, auxiliary component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_510_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20353..21219)
DNA (867bp) protein (289aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component n=1 Tax=Rhodanobacter denitrificans RepID=I4WVY1_9GAMM
ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:AGG90421.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_510_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21292..22068)
DNA (777bp) protein (259aa)
Conserved hypothetical integral membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVY2_9GAMM
hypothetical protein
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:AGG90422.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_510_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22065..22901)
DNA (837bp) protein (279aa)
ABC-type transport system involved in resistance to organic solvents, ATPase component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNI3_9GAMM
ABC-type transport system involved in resistance to organic solvents, ATPase component {ECO:0000313|EMBL:EIM01025.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type transport system involved in resistance to organic solvents, ATPase component
scnpilot_solids1_trim150_scaffold_510_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22986..23636)
DNA (651bp) protein (217aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2B9_9GAMM
scnpilot_solids1_trim150_scaffold_510_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23633..24478)
DNA (846bp) protein (282aa)
TIGR00255 family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHK2_9GAMM
TIGR00255 family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_510_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24564..25298
DNA (735bp) protein (245aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RNAse PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRK7_9GAMM
scnpilot_solids1_trim150_scaffold_510_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25306..25896
DNA (591bp) protein (197aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
Non-canonical purine NTP pyrophosphatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRK8_9GAMM
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
scnpilot_solids1_trim150_scaffold_510_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25906..27072
DNA (1167bp) protein (389aa)
HemN family oxidoreductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRK9_9GAMM
HemN family oxidoreductase {ECO:0000313|EMBL:EIL89850.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative oxygen-independent coproporphyrinogen III oxidase
scnpilot_solids1_trim150_scaffold_510_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27157..29433
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNJ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01032.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF1631)
scnpilot_solids1_trim150_scaffold_510_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29430..29792
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C8_9GAMM
PilZ domain-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying items 1-30 of 40 in total

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