name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids1_trim150_scaffold_540_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..1147
|
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA topoisomerase 4 subunit B n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJZ9_9GAMM
DNA topoisomerase IV, B subunit, proteobacterial
|
|
scnpilot_solids1_trim150_scaffold_540_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1411..2934
|
Amino acid transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK03_9GAMM
Amino acid transporter {ECO:0000313|EMBL:EIL87544.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family
|
|
scnpilot_solids1_trim150_scaffold_540_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3044..4504
|
Cationic amino acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WLI4_9GAMM
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AGG88530.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids1_trim150_scaffold_540_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5024..5353)
|
High potential iron-sulfur protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRH2_9GAMM
High potential iron-sulfur protein
High potential iron-sulfur protein {ECO:0000313|EMBL:EIM02064.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
scnpilot_solids1_trim150_scaffold_540_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5520..6173
|
Methylthioribulose-1-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_01677}; Short=MTRu-1-P dehydratase {ECO:0000256|HAMAP-Rule:MF_01677};; EC=4.2.1.109 {ECO:0000256|HAMAP-Rule:MF_01677};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
methylthioribulose-1-phosphate dehydratase (EC:4.2.1.109)
Methylthioribulose-1-phosphate dehydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK06_9GAMM
|
|
scnpilot_solids1_trim150_scaffold_540_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6170..6739
|
Acireductone dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEY4_9GAMM
Acireductone dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00009702}; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00090345}; Acireductone dioxygenase (Fe(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; Acireductone dioxygenase (Ni(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis
hypothetical protein, contains double-stranded beta-helix domain
|
|
scnpilot_solids1_trim150_scaffold_540_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6836..7522
|
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Enolase-phosphatase E1 n=1 Tax=Rhodanobacter denitrificans RepID=I4WLI0_9GAMM
acireductone synthase
|
|
scnpilot_solids1_trim150_scaffold_540_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7580..9388)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347619B
Amidohydrolase 3 {ECO:0000313|EMBL:EIL95423.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
amidohydrolase 3; K07047
rbh
|
|
scnpilot_solids1_trim150_scaffold_540_9 |
Not on your lists |
comp(9459..11894)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C6ABA
Ferric enterobactin receptor {ECO:0000313|EMBL:EQD31531.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
outer membrane cobalamin receptor protein
|
|
scnpilot_solids1_trim150_scaffold_540_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12200..14005
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347619B
Amidohydrolase 3 {ECO:0000313|EMBL:EIL95423.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
amidohydrolase 3; K07047
|
|
scnpilot_solids1_trim150_scaffold_540_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14087..14407)
|
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036AE1D6
Uncharacterized protein {ECO:0000313|EMBL:EIM03459.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
|
|
scnpilot_solids1_trim150_scaffold_540_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14490..15404)
|
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRF4_9GAMM
cation diffusion facilitator family transporter
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids1_trim150_scaffold_540_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15492..15926)
|
MerC mercury resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG3_9GAMM
MerC mercury resistance protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids1_trim150_scaffold_540_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16043..16558)
|
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG2_9GAMM
Fe2+/Zn2+ uptake regulation protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids1_trim150_scaffold_540_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16904..18307)
|
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK27_9GAMM
|
|
scnpilot_solids1_trim150_scaffold_540_16
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18375..18755
|
Uncharacterized protein n=3 Tax=Ralstonia RepID=C6BGZ5_RALP1
Uncharacterized protein {ECO:0000313|EMBL:AJW45122.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_540_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18823..19692)
|
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK31_9GAMM
acetyl-CoA carboxylase carboxyltransferase subunit alpha
|
|
scnpilot_solids1_trim150_scaffold_540_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19804..20604)
|
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRE3_9GAMM
|
|
scnpilot_solids1_trim150_scaffold_540_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20601..21821)
|
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tryptophan synthase beta chain n=2 Tax=Rhodanobacter denitrificans RepID=M4NCT4_9GAMM
|
|
scnpilot_solids1_trim150_scaffold_540_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22020..22643)
|
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFV5_9GAMM
|
|
scnpilot_solids1_trim150_scaffold_540_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22640..23407)
|
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tRNA pseudouridine synthase A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK36_9GAMM
pseudouridylate synthase I
|
|
scnpilot_solids1_trim150_scaffold_540_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23482..25830)
|
FimV N-terminal domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLA0_9GAMM
FimV N-terminal domain protein
FimV N-terminal domain protein {ECO:0000313|EMBL:AGG88496.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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|
scnpilot_solids1_trim150_scaffold_540_23
unknown
|
Not on your lists |
comp(25960..26259)
|
This feature has no annotations |
|
scnpilot_solids1_trim150_scaffold_540_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26259..27290)
|
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCW3_9GAMM
|
|
scnpilot_solids1_trim150_scaffold_540_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27298..28341)
|
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK39_9GAMM
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EIL87580.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lactate dehydrogenase-like oxidoreductase
|
|
scnpilot_solids1_trim150_scaffold_540_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28346..29449)
|
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK40_9GAMM
|
|
scnpilot_solids1_trim150_scaffold_540_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29514..30440)
|
(LSU ribosomal protein L3P)-glutamine N5-methyltransferase (EC:2.1.1.-)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK41_9GAMM
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:EIL87582.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
|
|
scnpilot_solids1_trim150_scaffold_540_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30521..31381
|
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRD0_9GAMM
phosphatidylserine decarboxylase precursor
|
|
scnpilot_solids1_trim150_scaffold_540_29
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31421..31930)
|
Uncharacterized protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4MVR1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KIF82113.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein; K09983 hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_540_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32057..32635)
|
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT3_9GAMM
|