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scnpilot_solids1_trim150_scaffold_656

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_656_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296..1042)
DNA (747bp) protein (249aa)
Copper resistance B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA6_9GAMM
Copper resistance B {ECO:0000313|EMBL:EIM00598.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uncharacterized protein involved in copper resistance
scnpilot_solids1_trim150_scaffold_656_2
unknown

Not on your lists

comp(1039..1416)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_656_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1413..3212)
DNA (1800bp) protein (600aa)
Copper-resistance protein, CopA family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW6_9GAMM
Copper-resistance protein, CopA family protein {ECO:0000313|EMBL:EIL89957.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copper-resistance protein, CopA family
scnpilot_solids1_trim150_scaffold_656_4
unknown

Not on your lists

4029..4715
DNA (687bp) protein (229aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_656_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4691..5260
DNA (570bp) protein (190aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=1 Tax=Rhodanobacter denitrificans RepID=M4NBY0_9GAMM
DNA-binding ferritin-like protein (oxidative damage protectant)
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:AGG87277.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_656_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5308..5880
DNA (573bp) protein (191aa)
putative flavoprotein id=12554969 bin=CNBR_ACIDO species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
putative flavoprotein rbh
Putative flavoprotein {ECO:0000313|EMBL:AGG87276.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_656_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5993..7264
DNA (1272bp) protein (424aa)
Amidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS9_9GAMM
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AGG87282.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_656_8
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7579..7803)
DNA (225bp) protein (75aa)
CsbD-like protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWX7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV33187.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
CsbD-like family protein 1
scnpilot_solids1_trim150_scaffold_656_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7914..8351)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWG6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89468.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_656_10
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8323..8586)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W032_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV33035.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_656_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8651..9427)
DNA (777bp) protein (259aa)
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W033_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_656_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9580..11367)
DNA (1788bp) protein (596aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
succinate dehydrogenase, flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMN4_9GAMM
scnpilot_solids1_trim150_scaffold_656_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11388..11792)
DNA (405bp) protein (135aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMN5_9GAMM
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIL88476.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_656_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11789..12184)
DNA (396bp) protein (132aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W036_9GAMM
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIL92827.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_656_15
unknown

Not on your lists

comp(12282..12470)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_656_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12590..13393
DNA (804bp) protein (268aa)
Folate-binding protein YgfZ n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH3_9GAMM
folate-binding protein YgfZ
Folate-binding protein YgfZ {ECO:0000313|EMBL:AGG89475.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_656_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13854..14288
DNA (435bp) protein (145aa)
Cell Wall Hydrolase n=2 Tax=Rhodanobacter denitrificans RepID=M4NPB3_9GAMM
Cell Wall Hydrolase
Cell Wall Hydrolase {ECO:0000313|EMBL:AGG89476.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_656_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14413..14904)
DNA (492bp) protein (164aa)
Outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH5_9GAMM
outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:AGG89477.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_656_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14951..15580)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88482.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative outer membrane lipoprotein
scnpilot_solids1_trim150_scaffold_656_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15740..16519
DNA (780bp) protein (260aa)
TatD family hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP99_9GAMM
TatD family hydrolase {ECO:0000313|EMBL:EIM01291.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hydrolase, TatD family
scnpilot_solids1_trim150_scaffold_656_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16699..17184
DNA (486bp) protein (162aa)
Polyhydroxyalkonate synthesis repressor PhaR n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP7_9GAMM
Polyhydroxyalkonate synthesis repressor PhaR {ECO:0000313|EMBL:EIL88488.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polyhydroxyalkanoate synthesis repressor PhaR
scnpilot_solids1_trim150_scaffold_656_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17263..18024
DNA (762bp) protein (254aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AGG89485.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AGG89485.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI4_9GAMM
scnpilot_solids1_trim150_scaffold_656_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18200..18604
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W051_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92842.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3293)
scnpilot_solids1_trim150_scaffold_656_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18663..19298
DNA (636bp) protein (212aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Cytochrome c biogenesis protein CcmA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W052_9GAMM
heme ABC exporter, ATP-binding protein CcmA
scnpilot_solids1_trim150_scaffold_656_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19470..20120
DNA (651bp) protein (217aa)
Heme exporter protein B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W053_9GAMM
heme exporter protein CcmB
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_656_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20125..20883
DNA (759bp) protein (253aa)
Heme exporter protein CcmC n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI9_9GAMM
heme exporter protein CcmC
Heme exporter protein CcmC {ECO:0000313|EMBL:AGG89490.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_656_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20880..21119
DNA (240bp) protein (80aa)
Cytochrome C biogenesis protein CcmD n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT35_9GAMM
Cytochrome C biogenesis protein CcmD {ECO:0000313|EMBL:EIM02627.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
heme exporter protein CcmD
scnpilot_solids1_trim150_scaffold_656_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21116..21598
DNA (483bp) protein (161aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMR9_9GAMM
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c-type biogenesis protein CcmE
scnpilot_solids1_trim150_scaffold_656_29
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21657..23648
DNA (1992bp) protein (664aa)
C-type cytochrome biogenesis membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMS0_9GAMM
C-type cytochrome biogenesis membrane protein {ECO:0000313|EMBL:EIL88511.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
c-type cytochrome biogenesis protein CcmF
scnpilot_solids1_trim150_scaffold_656_30
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23645..24187
DNA (543bp) protein (181aa)
thiol:disulfide interchange protein n=1 Tax=Dyella japonica RepID=UPI00031607D7
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AHX12712.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily
Displaying items 1-30 of 33 in total

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