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scnpilot_solids1_trim150_scaffold_868

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_868_1
unknown

Not on your lists

1..132
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_868_2
unknown

Not on your lists

203..607
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_868_3
unknown

Not on your lists

comp(539..715)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_868_4
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(829..2406)
DNA (1578bp) protein (526aa)
Integrase family protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=I7FID9_GEOSL
Uncharacterized protein {ECO:0000313|EMBL:KGO99772.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_868_trna_1
unknown

Not on your lists

comp(2492..2565)
DNA (74bp)
transferRNA Met
scnpilot_solids1_trim150_scaffold_868_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2733..3266
DNA (534bp) protein (178aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA pyrophosphohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL2_9GAMM
NTP pyrophosphohydrolase
scnpilot_solids1_trim150_scaffold_868_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3305..3541
DNA (237bp) protein (79aa)
Bacterioferritin-associated ferredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NIZ8_9GAMM
bacterioferritin-associated ferredoxin
Bacterioferritin-associated ferredoxin {ECO:0000313|EMBL:AGG90879.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_868_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3681..4151
DNA (471bp) protein (157aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Bacterioferritin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL0_9GAMM
bacterioferritin
scnpilot_solids1_trim150_scaffold_868_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4222..4593
DNA (372bp) protein (124aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ42_9GAMM
Iron-sulfur cluster assembly accessory protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_868_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4603..5574
DNA (972bp) protein (324aa)
Zn-finger containing NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ41_9GAMM
Zn-finger containing NTP pyrophosphohydrolase
Zn-finger containing NTP pyrophosphohydrolase {ECO:0000313|EMBL:AGG90884.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_868_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5707..6573
DNA (867bp) protein (289aa)
Membrane protein required for beta-lactamase induction n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK4_9GAMM
Membrane protein required for beta-lactamase induction {ECO:0000313|EMBL:EIL98245.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protein required for beta-lactamase induction
scnpilot_solids1_trim150_scaffold_868_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6619..7929)
DNA (1311bp) protein (437aa)
Fatty acid permease / acyltransferase fusion protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK3_9GAMM
Fatty acid permease / acyltransferase fusion protein {ECO:0000313|EMBL:EIL98244.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids1_trim150_scaffold_868_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8017..10161)
DNA (2145bp) protein (715aa)
glycyl-tRNA synthetase beta chain (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_868_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10154..11065)
DNA (912bp) protein (304aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glycyl-tRNA synthetase alpha chain (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQQ0_9GAMM
scnpilot_solids1_trim150_scaffold_868_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11163..13007
DNA (1845bp) protein (615aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Rhodanobacter denitrificans RepID=M4NLE4_9GAMM
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:AGG90892.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
scnpilot_solids1_trim150_scaffold_868_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13004..13765
DNA (762bp) protein (254aa)
Glutamine amidotransferase {ECO:0000313|EMBL:EIL98238.1}; EC=6.3.5.2 {ECO:0000313|EMBL:EIL98238.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glutamine amidotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFJ7_9GAMM
GMP synthase family protein
scnpilot_solids1_trim150_scaffold_868_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13730..14413)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89971.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_868_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14450..15661)
DNA (1212bp) protein (404aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKX3_9GAMM
scnpilot_solids1_trim150_scaffold_868_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15841..17283
DNA (1443bp) protein (481aa)
Metalloendopeptidase-like membrane protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NTT7_9GAMM
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AGG90896.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_868_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17291..18421
DNA (1131bp) protein (377aa)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGV8_9GAMM
molecular chaperone
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_868_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18613..19833)
DNA (1221bp) protein (407aa)
Signal transducer n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW0_9GAMM
Major Facilitator Superfamily transporter
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AGG90899.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 21 items

View Taxonomy