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scnpilot_solids1_trim150_scaffold_1835

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1835_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..365
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR85_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89343.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1835_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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384..1049
DNA (666bp) protein (222aa)
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q8_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1835_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1152..2108
DNA (957bp) protein (319aa)
GTPase Era n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPM0_9GAMM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
GTP-binding protein Era
scnpilot_solids1_trim150_scaffold_1835_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2220..2930
DNA (711bp) protein (237aa)
DNA repair protein RecO n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPM1_9GAMM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA replication and repair protein RecO
scnpilot_solids1_trim150_scaffold_1835_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2919..3683)
DNA (765bp) protein (255aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR89_9GAMM
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EIM01414.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_1835_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3729..5750
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95153.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1835_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5793..6395
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR91_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1835_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6562..7905
DNA (1344bp) protein (448aa)
23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Rhodanobacter denitrificans RepID=I4WR92_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1835_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8043..8576
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NNT3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89336.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1835_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8570..9598
DNA (1029bp) protein (343aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Beta-hexosaminidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPM7_9GAMM
beta-glucosidase-like glycosyl hydrolase
scnpilot_solids1_trim150_scaffold_1835_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9595..10188
DNA (594bp) protein (198aa)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:AHX13616.1}; EC=2.4.2.8 {ECO:0000313|EMBL:AHX13616.1};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR95_9GAMM
hypoxanthine-guanine phosphoribosyltransferase
scnpilot_solids1_trim150_scaffold_1835_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10262..10786
DNA (525bp) protein (175aa)
pfpI; protease; K05520 protease I [EC:3.2.-.-]
Protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W171_9GAMM
Protease {ECO:0000313|EMBL:EIL93212.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Displaying 12 items

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