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scnpilot_solids1_trim150_scaffold_1998

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1998_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..573
DNA (573bp) protein (191aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Two-component system sensor protein pils n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ0_9GAMM
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_1998_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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645..2027
DNA (1383bp) protein (461aa)
Fis family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK6_9GAMM
Fis family transcriptional regulator {ECO:0000313|EMBL:EIL92297.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
scnpilot_solids1_trim150_scaffold_1998_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2151..3758)
DNA (1608bp) protein (536aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK5_9GAMM
Signal transduction histidine kinase {ECO:0000313|EMBL:EIL92296.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_1998_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3762..4208)
DNA (447bp) protein (149aa)
Two-component system response regulator protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXH1_9GAMM
Two-component system response regulator protein {ECO:0000313|EMBL:EIL91912.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_solids1_trim150_scaffold_1998_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4218..5999)
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Putative two-component sensor histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXH2_9GAMM
PAS domain S-box
scnpilot_solids1_trim150_scaffold_1998_6
unknown

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comp(6225..6440)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1998_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6537..7136)
DNA (600bp) protein (200aa)
Outer membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTW9_9GAMM
Outer membrane protein {ECO:0000313|EMBL:EIL90660.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
outer membrane protein (fragment)
scnpilot_solids1_trim150_scaffold_1998_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7367..7876)
DNA (510bp) protein (170aa)
Single-stranded DNA-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W169_9GAMM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
single stranded DNA-binding protein
scnpilot_solids1_trim150_scaffold_1998_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8060..9049)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W162_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93203.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative membrane-associated protein
scnpilot_solids1_trim150_scaffold_1998_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9112..9927)
DNA (816bp) protein (272aa)
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXH9_9GAMM
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIL91920.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
arabinose efflux permease family protein
Displaying 10 items

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