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scnpilot_solids1_trim150_scaffold_245_24

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 26280..27329

Top 3 Functional Annotations

Value Algorithm Source
Psp operon transcriptional activator PspF n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL45_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 346.0
  • Bit_score: 571
  • Evalue 6.30e-160
Psp operon transcriptional activator PspF {ECO:0000313|EMBL:EIL87936.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 346.0
  • Bit_score: 571
  • Evalue 8.80e-160
pspF; Psp operon transcriptional activator; K03974 psp operon transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 359.0
  • Bit_score: 392
  • Evalue 1.30e-106

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGCCGGATACGCTGTCATCGGAAGCGCCAACCACAACCATGTTGGGCGAGTCGCCAGCCTTCCTGGATCTGCTGGAACATGCCTCGCGTGTCGCCGCCGTAAACAAGCCGGTGCTGGTCATCGGCGAACGCGGCACCGGCAAGGAACTGATTGCGGCACGACTGCATTATCTGTCGCCGCGCTGGCAGGCCCCGCTGGTCAAGTTGAATTGCGCGACCTTGACCGAAGCGCTGCTTGAGACCGAGTTGTTCGGCCATGAGGCGGGCGCCTTCACTGGTGCCACCCGCCGCCACGTCGGCCGCTTCGAGCAGGCGCACGGCGGCACGCTGTTCCTCGACGAGCTGGCCACCGTGTCGACGCGCGTGCAGGAAAAGATCCTGCGTGCGGTCGAGTACGGCCAGTTCGAGCGCGTCGGTGGCGGCGAGACGCTGACCGTGGATGTGCGCATTGTCGGGGCCACCAGCGGGGACCTGCCGGCCGCCGTGCGGGCCGGAACGTTTCGTGCCGACCTGCTCGACCGGCTGGCCTTCGACGTGCTGACGGTGCCTCCACTGCGCGCGCGCGCGGGAGACATCATGCAATTGGCCGAGCATTTTGCCGTCGACATCAGTCGCGAATTGGGCCGAAAACTCTTCGCCGGTTTCACCGGGTCCGCCCGTATGGCGCTGATCCATTACGCCTGGCCGGGGAATGTGCGTGAACTGAAAAACGTCGTCGAGCGCTCAGTGCATCGCAGCGCAGCCGCCGCGCCGGTCGACACCATCGTCTTCGATCCCTTCGCTTCCGCCTTTCGACCTCCGGCGGAGGCTGTCGCGGACGATGTCGCCGCGCCACCGGCGGAAGAATCCATCCCTCTCCCATGCGACATCAAAGCGCAAGTCGCCATCCTGGAAGTCGATCTGATCAGGCGCGCCCTGGCCGAGGCCCGCTATAACCAGACCGAAGCCGCACCGCTGCTGGGCCTGAGCTATCACCAGTTGCGCGCGCTGTTGCGCAAGCACGGCATGGTGAAATCACGCGGCAGCCACGATGGCTCGGCGACGGCATGA
PROTEIN sequence
Length: 350
MPDTLSSEAPTTTMLGESPAFLDLLEHASRVAAVNKPVLVIGERGTGKELIAARLHYLSPRWQAPLVKLNCATLTEALLETELFGHEAGAFTGATRRHVGRFEQAHGGTLFLDELATVSTRVQEKILRAVEYGQFERVGGGETLTVDVRIVGATSGDLPAAVRAGTFRADLLDRLAFDVLTVPPLRARAGDIMQLAEHFAVDISRELGRKLFAGFTGSARMALIHYAWPGNVRELKNVVERSVHRSAAAAPVDTIVFDPFASAFRPPAEAVADDVAAPPAEESIPLPCDIKAQVAILEVDLIRRALAEARYNQTEAAPLLGLSYHQLRALLRKHGMVKSRGSHDGSATA*