ggKbase home page

scnpilot_solids1_trim150_scaffold_245_29

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(33424..33774)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002EBB5D3 similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 109.0
  • Bit_score: 178
  • Evalue 4.00e-42
Variovorax paradoxus strain MEDvA23 contig_83, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22548.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 114.0
  • Bit_score: 178
  • Evalue 5.60e-42
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 109.0
  • Bit_score: 165
  • Evalue 1.10e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGTCCCCAGCCGACGACGACGCCTTTGAACTCTACGACCTGAAGGTCGAGGTGGTGGCCCCGCCCGGCGCGAAGCTGTACTGCTCGGCCAGGGTCGGCGACAGCTTCGAGCTGCGCGGCGAGCTGCTGCATCTCCCCGACGGCCAGGGCTTTTCGATCTACTCGCTGGCTGCGGTGCTGCCGCTGCTGGCGGCCAAGCAACGGGTGACCGACGCCAACGACTGGATGAGTACGGACGCCGAAGTCGCCTGCCCCGATCCCAACTGCCCGTCGCGCCTGCGCATCACCCGGCTCGGTCGCCGGCGCTTCCACCACGGTGAAGTCACGGTTGCGCGGAAGCCGGCGCCATGA
PROTEIN sequence
Length: 117
MSPADDDAFELYDLKVEVVAPPGAKLYCSARVGDSFELRGELLHLPDGQGFSIYSLAAVLPLLAAKQRVTDANDWMSTDAEVACPDPNCPSRLRITRLGRRRFHHGEVTVARKPAP*