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scnpilot_solids1_trim150_scaffold_305_23

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 23932..24468

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 173.0
  • Bit_score: 314
  • Evalue 1.30e-82
Peptide deformylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 173.0
  • Bit_score: 314
  • Evalue 9.30e-83
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 178.0
  • Bit_score: 312
  • Evalue 8.50e-83

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGATCCGTGAAATCCTGAAGATGGGTGATCCGCGGCTGTTGCGCATTGCCGCCCCAGTGCCCGGGTCCCTGCTGGGCACCGCCGAGCTCGAGGCCCTGATTGCCGACATGTTCGAGACCATGGCGGCGGCCGATGGCGTCGGCCTGGCCGCACCGCAGATCGGCGTCGACCTGCAACTGGTGATCTTCGGCTTCGACAACAGCGAGCGTTATCCCGACGCGCCTGCCGTGCCGCGCACGATCCTGCTCAACCCGGTGATCACGCCGCTGTCCAGGGACATGGAAGAGGGCTGGGAAGGTTGCCTGTCCGTGCCTGGTCTGCGCGGTGCGGTCAACCGCTACAGCATGATCCGCTACGAAGGCATCGACCCGCACGGCCAACGCATCGGCCGCGCCGCCGAGGGCTTCCATGCCCGCGTCGTGCAACACGAGTGCGACCACCTGATCGGCCGCCTGTATCCCTCGCGCATCACCGACTTTGGCAAGTTCGGCTACACCGATGTGCTGTTTCCGGCCGAGCTTGCGCCCGAAGCCTGA
PROTEIN sequence
Length: 179
MIREILKMGDPRLLRIAAPVPGSLLGTAELEALIADMFETMAAADGVGLAAPQIGVDLQLVIFGFDNSERYPDAPAVPRTILLNPVITPLSRDMEEGWEGCLSVPGLRGAVNRYSMIRYEGIDPHGQRIGRAAEGFHARVVQHECDHLIGRLYPSRITDFGKFGYTDVLFPAELAPEA*