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scnpilot_solids1_trim150_scaffold_292_2

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 257..769

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5S9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 171.0
  • Bit_score: 256
  • Evalue 2.20e-65
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 171.0
  • Bit_score: 256
  • Evalue 3.10e-65
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 175.0
  • Bit_score: 242
  • Evalue 1.00e-61

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGACGACCGGTCGGCGCGTCCTGGTCGGGCGCATCGTCGGTCTGTATGGCGTGCAGGGCTGGCTCAAGATCGAATCGTGGACCGAGCCGCGCCTGGGTATCTTCGCGTATCAGCCGTGGTTGCTGGGGGCGGCTCCAGACGAGGTGATCAGCATTGCCGGAGCCACTGGCCGCGCCCAGGGCAAGGGCGTGGTGGCCCAGCTTCCCGGCATCGGGTTGCGTGAGCAGGCAGCAGCCTTGGTCGGGCGCGACATCTACGTGGCGCGGTCAACGCTGCCGCCGGTCGCAGCCGATGAATACTACTGGACGGATTTGGAGGGTTTGGCGGTTTTTACGCTGGAAGGCCGTGCATTGGGCCGGGTCAGCCACCTGTTTGCCACCGGTGCGAACGATGTACTGGTGGTGCGTGACGGCGATCGCGAACGGCTGATTCCGTTTGCTCAAGGACCGGTGGTGAAGTCGGTGGATTTGGCCACCCAGCGCATGCTGGTGGACTGGGATCCGGATTTCTGA
PROTEIN sequence
Length: 171
MTTGRRVLVGRIVGLYGVQGWLKIESWTEPRLGIFAYQPWLLGAAPDEVISIAGATGRAQGKGVVAQLPGIGLREQAAALVGRDIYVARSTLPPVAADEYYWTDLEGLAVFTLEGRALGRVSHLFATGANDVLVVRDGDRERLIPFAQGPVVKSVDLATQRMLVDWDPDF*