ggKbase home page

scnpilot_solids1_trim150_scaffold_262_19

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 30959..31555

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 type 2 n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KN82_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 159.0
  • Bit_score: 121
  • Evalue 7.50e-25
Uncharacterized protein {ECO:0000313|EMBL:KJS05986.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 166.0
  • Bit_score: 123
  • Evalue 3.60e-25
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 165.0
  • Bit_score: 110
  • Evalue 7.10e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gammaproteobacteria bacterium BRH_c0 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCCATCCGACCGCCGTGAGTGGTTCCTCAACCAGGTGTTCTGCCACCGGCGGATGCTGCGCGCCTACCTGCGCAGATACCTGTCCGCCGACGAGGACATCGAAGACGTCATCCAGGACACCTACCTGCGCATCTACGGCATCCAGGACTACACCACGGTCGAATCGCCCAAGGCGCTGCTGATCACCATTGCCCACAACCTGGCGGTGGAACTCGGGCGTCGTCGGGTCAGCCGTGCCACCGACGCAGTGGCGGATTTCGACACACTGGGCGTCTCTTCCGGCAACCCCCATCTCGAAGAGCAGCTCGACGCGCGCCGCCGCTTCGAGGCGTTCTGCTCGGCGGTGGACAGCCTGCCGCCGATCTGCCGGCGGGTGTTCGTGCTGAGGAAGGTCTACAAATTGTCGCAGGCGGAAATCAGTGCCGTGTTGGGCATCTCGCAGAGCACCATCGAGAAGCATGTCGCCAAGGGCCTGGTGCGCTGCCGGGATCACCTGCGCAGCCATGATCTGGTGGGTCACTCCATGGCGACCCGATCCGCGCCGACGGATGATGGCGCCGACAGTTGCCTGGCGGTTGAAGGAGACCTCCGATGA
PROTEIN sequence
Length: 199
MPSDRREWFLNQVFCHRRMLRAYLRRYLSADEDIEDVIQDTYLRIYGIQDYTTVESPKALLITIAHNLAVELGRRRVSRATDAVADFDTLGVSSGNPHLEEQLDARRRFEAFCSAVDSLPPICRRVFVLRKVYKLSQAEISAVLGISQSTIEKHVAKGLVRCRDHLRSHDLVGHSMATRSAPTDDGADSCLAVEGDLR*