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scnpilot_solids1_trim150_scaffold_262_21

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 32724..33131

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid n=1 Tax=Rhizobium sp. CF080 RepID=J2JKP3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 101.0
  • Bit_score: 69
  • Evalue 2.30e-09
Ligand-gated channel {ECO:0000313|EMBL:AJQ45953.1}; TaxID=1384061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S13.1.2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 122.0
  • Bit_score: 72
  • Evalue 5.00e-10
ferrichrome-iron receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 81.0
  • Bit_score: 67
  • Evalue 3.60e-09

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCAGCGGATGGGAAAGACCACATGGCTTTCGCGTGGCCCGCTCTTGCTGGCGCTGCTGCTCGCCTTACCCGGCATGTCGGCATGCGTCGCCGCAGGCGCCAAAGACATGCTCTTCGACATTCCGGCGCAGCCGGCTGCGTCGGCATTGAACGAGTTTGCCAAGCAGGCGGATATCACACTGATCTTCTCCTATGACCTTGTCGCCGGCGAAAATACCTATTCGCTGCAAGGCCGCTTCACCGTGGACGCGGGGCTGACTCTCCTGCTGAGCGGAACCCAGCTGGGCTATCGGCATACCGCAGATGGCCCCTATCTCATTTGCCTGCGGAAGTCCTGTGGGCCAGGCGGGCCAGGCGACGCGGAGAAGCCGGGTGTCCATGAACCGGCGCAGCCGCGTGCGGAATAG
PROTEIN sequence
Length: 136
MQRMGKTTWLSRGPLLLALLLALPGMSACVAAGAKDMLFDIPAQPAASALNEFAKQADITLIFSYDLVAGENTYSLQGRFTVDAGLTLLLSGTQLGYRHTADGPYLICLRKSCGPGGPGDAEKPGVHEPAQPRAE*