ggKbase home page

scnpilot_solids1_trim150_scaffold_262_23

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 36073..36936

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 276.0
  • Bit_score: 401
  • Evalue 2.90e-109
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 276.0
  • Bit_score: 401
  • Evalue 1.30e-108
Diaminopimelate epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUH3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 276.0
  • Bit_score: 404
  • Evalue 1.10e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGTTGAACACGCAATCGGTCCTGCGCTTCAGCAAGATGCACGGCCTGGGCAACGACTTCGTCATGCTCGACTGCCGCGAGCGGTTGATGCCGCTGGACACCATGCAACTGCGTGCACTGAGCAACCGGCGCACCGGCGTCGGCTTCGACCAGCTGCTCAGCATCGAGCCCGCGCGCGATCCGGCCTGTGCGTTTGCCTATGGCATCTGGAACGCGGACGGCTCCCTGGTCGGCCAATGCGGCAACGGCGTGCGCTGCGTGGCCGCGTGGCTGCACCGTGCCGGCCTGCTGGCGCTGGATACCACGGTACGACTGCAGAGTCCTTCCGGCCCGGTGTCGGTGCGCCTGCTCGGTCCGACCGAGGTGACCGTCGACATGGGCGAGCCGGTGTTCGACCTGCCGCGCATCCCGTTCCTGGCCGACGCCGTGGCGCCGCTGTACACCGTGGACGTCGGTGGCGAGGAGGTGCAGATCAGCGCGCTGTCCATGGGCAATACGCAGGGCGTGCTCAGCGTGGACGACCTGGACGATCCGCGCGTGGCGCGGCTTGGCCCCCTGCTGACCATGCACCCGCGCTTCCCCGAGCAGGCCAACATCGCCGTGGTGCAGAAACTGGACCGCAGCCACGTGCGCATGCACGAGCACGAGCGTGGCGCCGGCTGGACCCAGGCCTGCGGCAGCGGCGCGTGCGCGACCGTGGTCGCCTTGCGCCAGCGCGGCGAGGTCGACGCCGAGGTGGAAGTGCGCATGCCCGGCGGCGCATTGCGCATCAGCTGGCCGGGTGTCGGCGAGCCGGTGTGGATGACGGGCCCGGCGGCCTTCGTGTTCGAGGGGGAATGGCCCATTCCCGAGCGGGCGCTTTGA
PROTEIN sequence
Length: 288
MLNTQSVLRFSKMHGLGNDFVMLDCRERLMPLDTMQLRALSNRRTGVGFDQLLSIEPARDPACAFAYGIWNADGSLVGQCGNGVRCVAAWLHRAGLLALDTTVRLQSPSGPVSVRLLGPTEVTVDMGEPVFDLPRIPFLADAVAPLYTVDVGGEEVQISALSMGNTQGVLSVDDLDDPRVARLGPLLTMHPRFPEQANIAVVQKLDRSHVRMHEHERGAGWTQACGSGACATVVALRQRGEVDAEVEVRMPGGALRISWPGVGEPVWMTGPAAFVFEGEWPIPERAL*