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scnpilot_solids1_trim150_scaffold_214_9

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 15965..16675

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter denitrificans RepID=M4NC10_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 234.0
  • Bit_score: 319
  • Evalue 3.80e-84
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 234.0
  • Bit_score: 319
  • Evalue 1.20e-84
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 234.0
  • Bit_score: 319
  • Evalue 5.40e-84

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGCAAGCACGCGCCACCGTGGCGTCCGGCGACCTTGCCGGTCTCGATGATCACGCACTGGTCGCCAGGGTCCTTGCTGGCCACCGCGAGGCGTTCCGCCACATCATGCAACGCTGCAACCAGCGCCTGTTCAGGGTCGCGCGCAGCGTGCTGCGCAATGACCAGGAAGCCGAGGATGTATTGCAGGAGTCGTACCTGCGCGCCTACCGCAAGCTCGATACCTTCCGCGGCGATGCCACCTTGCTGACCTGGCTCACCAGCATCGTGCTCAACGAGGCGCGTGGGCGCCTACGCAAGCGCCACAACATGGTCGAGCTGGACCAGGTGGATCTGGCCCAGGACGACAGCCACGTCGTTGCCTTCCGTGCCCGTTCGGGCAGCGAGGACCCGATGGCCGATGCCGCACGCGCGCAGATGCGGCAGCTGTTGGAGCGCGCGATCGATGCGCTGCCGCCGGACTTCCGCACGGTGTATATGTTGCGCGAAATCGAGGGCTGCAGCGTGGAAGAGACCGCGGCCCAATTGGAGCTCAATCCGGCCACGGTGAAGACCCGCCTGTTCCGCGCCCGCAGCCAGCTGCGTGACAACCTGCAAGGCACCTTCGCCAGCACCCTGACCGAGACCTTCGCGTTCATGGGTGAACGTTGCGAGCGCCTGAGCAACGCGGTGATGGCACGCCTCGAATCCGAGGCTTCGTCCCCGCCAGATTGA
PROTEIN sequence
Length: 237
MQARATVASGDLAGLDDHALVARVLAGHREAFRHIMQRCNQRLFRVARSVLRNDQEAEDVLQESYLRAYRKLDTFRGDATLLTWLTSIVLNEARGRLRKRHNMVELDQVDLAQDDSHVVAFRARSGSEDPMADAARAQMRQLLERAIDALPPDFRTVYMLREIEGCSVEETAAQLELNPATVKTRLFRARSQLRDNLQGTFASTLTETFAFMGERCERLSNAVMARLESEASSPPD*