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scnpilot_solids1_trim150_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_214_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..1170)
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U29_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids1_trim150_scaffold_214_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1280..2476)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACV9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88885.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_214_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2542..4845)
DNA (2304bp) protein (768aa)
Glutamate carboxypeptidase II n=1 Tax=Rhodanobacter denitrificans RepID=I4WWT1_9GAMM
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AGG89537.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_214_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4946..7885)
DNA (2940bp) protein (980aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB0_9GAMM
outer membrane cobalamin receptor protein
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AGG90558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_214_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(8372..11599)
DNA (3228bp) protein (1076aa)
BNR/Asp-box repeat protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5I2_ACIC5
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:AIE84516.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
BNR/Asp-box repeat protein
scnpilot_solids1_trim150_scaffold_214_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11714..14149
DNA (2436bp) protein (812aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG41_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL98432.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids1_trim150_scaffold_214_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14259..14912)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03766.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_214_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15113..15751
DNA (639bp) protein (213aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG1_9GAMM
GTP cyclohydrolase I
scnpilot_solids1_trim150_scaffold_214_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15965..16675
DNA (711bp) protein (237aa)
RNA polymerase sigma factor n=1 Tax=Rhodanobacter denitrificans RepID=M4NC10_9GAMM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_214_10
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16740..18101)
DNA (1362bp) protein (454aa)
hippurate hydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32] rbh
Hippurate hydrolase {ECO:0000313|EMBL:CCA90328.1}; EC=3.5.1.32 {ECO:0000313|EMBL:CCA90328.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030C6AAE
scnpilot_solids1_trim150_scaffold_214_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18238..19035)
DNA (798bp) protein (266aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NCZ5_9GAMM
thiol-disulfide isomerase-like thioredoxin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_214_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19171..19875)
DNA (705bp) protein (235aa)
6-phosphogluconolactonase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUW1_9GAMM
6-phosphogluconolactonase {ECO:0000313|EMBL:EIL91002.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
6-phosphogluconolactonase
scnpilot_solids1_trim150_scaffold_214_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20379..22229
DNA (1851bp) protein (617aa)
TonB-dependent receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEQ9_9GAMM
TonB-dependent receptor protein {ECO:0000313|EMBL:EIL97950.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
TonB-dependent vitamin B12 receptor
scnpilot_solids1_trim150_scaffold_214_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22426..25581
DNA (3156bp) protein (1052aa)
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WER0_9GAMM
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIL97951.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cation/multidrug efflux pump
scnpilot_solids1_trim150_scaffold_214_15
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25854..26759)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J031_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ81391.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
scnpilot_solids1_trim150_scaffold_214_16
unknown

Not on your lists

comp(26823..27692)
DNA (870bp) protein (290aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_214_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28779..30404
DNA (1626bp) protein (542aa)
Carboxypeptidase-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET7_9GAMM
Peptidase S10 {ECO:0000313|EMBL:AHX15186.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
carboxypeptidase C (cathepsin A)
scnpilot_solids1_trim150_scaffold_214_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30432..30836
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WN28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45732.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_214_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31001..31357
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003734066
Uncharacterized protein {ECO:0000313|EMBL:GAD23871.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_214_20
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31428..33791)
DNA (2364bp) protein (788aa)
Alpha-1,2-mannosidase family protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WB81_9GAMM
Sugar hydrolase {ECO:0000313|EMBL:KGI78424.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
alpha-1,2-mannosidase, putative
scnpilot_solids1_trim150_scaffold_214_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33984..35234
DNA (1251bp) protein (417aa)
Glucose/galactose transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRR1_9GAMM
Glucose/galactose transporter {ECO:0000313|EMBL:EIL89902.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
L-fucose:H+ symporter permease
scnpilot_solids1_trim150_scaffold_214_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35231..36211
DNA (981bp) protein (327aa)
sugar kinase; K00847 fructokinase [EC:2.7.1.4]
Sugar kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRR0_9GAMM rbh
Sugar kinase {ECO:0000313|EMBL:EIL89901.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_214_23
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36237..36569)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GTZ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIL62114.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylphenolia.;"
yegP; hypothetical protein; K09946 hypothetical protein
scnpilot_solids1_trim150_scaffold_214_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36837..38030
DNA (1194bp) protein (398aa)
N-acylglucosamine 2-epimerase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A3A33C
Stenotrophomonas maltophilia strain ZBG7B contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85951.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
N-acyl-D-glucosamine 2-epimerase
scnpilot_solids1_trim150_scaffold_214_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

38096..39523
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A5CEF
Mannosyl-oligosaccharide 1,2-alpha-mannosidase rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids1_trim150_scaffold_214_26
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39617..41617)
DNA (2001bp) protein (667aa)
X-Pro dipeptidyl-peptidase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L1_9GAMM
Glutaryl-7-ACA acylase {ECO:0000313|EMBL:KGI78371.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
X-Pro dipeptidyl-peptidase domain-containing protein
scnpilot_solids1_trim150_scaffold_214_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41827..42423)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9N3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96174.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K09965 hypothetical protein
scnpilot_solids1_trim150_scaffold_214_28
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42660..43220
DNA (561bp) protein (187aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU5_9GAMM
Lipid A 3-O-deacylase (PagL)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_214_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43285..44850)
DNA (1566bp) protein (522aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY43_9GAMM
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EIL92134.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
drug resistance transporter, EmrB/QacA subfamily
scnpilot_solids1_trim150_scaffold_214_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44910..46145)
DNA (1236bp) protein (412aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU7_9GAMM
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL90988.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
multidrug resistance efflux pump
Displaying items 1-30 of 43 in total

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