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scnpilot_solids1_trim150_scaffold_481_16

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(17809..19554)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FKD8_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 563.0
  • Bit_score: 621
  • Evalue 8.80e-175
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:ENZ93834.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 563.0
  • Bit_score: 621
  • Evalue 1.20e-174
virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 559.0
  • Bit_score: 474
  • Evalue 4.20e-131

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Taxonomy

Xanthomonas fragariae → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1746
ATGAACACGCCACGCGGCAAGGCGATTGTCCTGGGCGGATTGTTGTTGCTGGCCCTGGTCGCCGGGCTGTGGATCAGCGGCTGGCTCGCCTTGTGGCTGCTTGGGCTGCGCGACCCACCCCGGATTGGCACCTACCTCGGTTACCTCCAGGCACTGGATCTGGATGCCGTGCGGCCCTATGCCTCGACCATCCGTCTTGCCGGCTGGACCGGCTTCGGGCTGCCGCTGGCGTCGTGGCTGATCGTCGCCGCCGCGACGCTCTGGCCGCGGGCGCGCGCGTTCCACGGCAATGCCCGCTTTGCCACCCGCGCCGACATCGCGCGCGCCGGTCTGCTGGAGGGCTGTCCTGAAGGCATCCTCATCGGCCGCTATCGCGGCGACTACCTCTATCTCGGCGGCACCCGGCACGTCATCGTGACCGCCCCGACCCGCAGCGGCAAGACCAGCTCCGTAGCCATTCCGGTGTTGCTGACCTACCAGCATTCCGTGGTGTGCCTCGACCTCAAGGGTGAGCTTTACCAATCGACCAGCGGCTATCGCGCCGCGACCGGGCAGGCGATCTACCGCTTTGCGCCATATGCCGAGGACGGACGCACCCATCGCTTCAATCCGCTTACGGCCGTTTCAGCCGATCCGCAGTTGCGCCTATCCGAACTGCAGACACTGGCAGCCATCCTGTACCCCGACGAAGCCGGCAAGGACCCCTTCTGGAGCCTGCAGTCGCGCGCCGCGTTCGTGGCTTTTGCCGCCTATTTGTTCGAGGCCTGGGAGGCCCAGGCCTCGCCGGCTGCGGATACCAATCCGGATGTCCCGAGCGGCAACCTGGCGTTCCCCAGCCTGGAGCGCATCCACCGCTTTTCCACCGGCGACGGCGGCGGCGACGGGCTGAAGGCCTACCTGCAGCAGCGGCGCGAAGCGCCCTTCGCCAGCGCCGCCACGCGCACGGCGCTCGCCAGCCTGACCAACATGGCGGAACAGACCCTGTCCTCGGTGATCGCCACCACCCAGGCGCCGCTGCAGCAATTCCTCAGCCCAACCCTGGCCGCCGCCACCGCTGCCACCGACTTCGACCCGCAACAGTTGCGCCGTCGCCCCAGTACCGTCTACGTGGTGATCCCCCCAAACCGGCTCGGCGAGGCAAGCAAGCTTCTCAACCTGTTCTTCTCCGTGGTGCTCGGCCAGAACCTCCGCCAGACGCCACAGGAGGATCCCTCGAGCAAGTACCAATTGCTGCTGTTGCTGGACGAATTCACTGCCATGGGCCGCGTCGACGTGCTGTCTGCGCGCATCGCCCTGACCGCCGGCTATGGGGTACGCGACCTGGCGATCATCCAGAGCCTGTCGCAACTCGACGCCACCTACGGCGCCGACGAGGCACGGACCTTCGTCACCAACCACGCCGCCAGCGTCGTCTTCACCCCGCGCGAGCAGCGCGACGCCGAGGCCTACTCGACGGCGCTGGGCGACACCACGGTCAAGCGGCGCAGCCGCGGGACCGGCAGGGGTGGCACCACGTACACCCATACCGAGGAACGCCGCGCCTTGCTGCTGCCGCAGGAACTGAAGGAGCTGCCCGAGGATGAAGAGATCATTTTCCTCGAAGGCTGTCGCCCGATCCGCTGCCGCAAGAACTGGTCCTTCAAGGATCGACGGCTGCAGCGGCGCATCATGCGGCCGGCAGCGCTCCCGTCCCCGCCCCGGCAACTCCAGGGCCACACCATGCCGACGACGCCCCGCCGCGCCTGA
PROTEIN sequence
Length: 582
MNTPRGKAIVLGGLLLLALVAGLWISGWLALWLLGLRDPPRIGTYLGYLQALDLDAVRPYASTIRLAGWTGFGLPLASWLIVAAATLWPRARAFHGNARFATRADIARAGLLEGCPEGILIGRYRGDYLYLGGTRHVIVTAPTRSGKTSSVAIPVLLTYQHSVVCLDLKGELYQSTSGYRAATGQAIYRFAPYAEDGRTHRFNPLTAVSADPQLRLSELQTLAAILYPDEAGKDPFWSLQSRAAFVAFAAYLFEAWEAQASPAADTNPDVPSGNLAFPSLERIHRFSTGDGGGDGLKAYLQQRREAPFASAATRTALASLTNMAEQTLSSVIATTQAPLQQFLSPTLAAATAATDFDPQQLRRRPSTVYVVIPPNRLGEASKLLNLFFSVVLGQNLRQTPQEDPSSKYQLLLLLDEFTAMGRVDVLSARIALTAGYGVRDLAIIQSLSQLDATYGADEARTFVTNHAASVVFTPREQRDAEAYSTALGDTTVKRRSRGTGRGGTTYTHTEERRALLLPQELKELPEDEEIIFLEGCRPIRCRKNWSFKDRRLQRRIMRPAALPSPPRQLQGHTMPTTPRRA*