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scnpilot_solids1_trim150_scaffold_567_18

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(19480..20013)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 177.0
  • Bit_score: 285
  • Evalue 8.50e-75
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 177.0
  • Bit_score: 285
  • Evalue 3.80e-74
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 290
  • Evalue 1.40e-75

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCTGATCGCGCTGAACAAGCCCTATGGCGTGCTGTGCCAGTTCACCGATGCACAGGGGCGCAGCACGCTGGCCTCATTCGTCTCCGAGCCGGGCGTCTATGCGGCCGGGCGCCTGGATCGTGACAGCGAGGGCCTGCTGCTCTTGACCGACGATGGCGCGCTCGCCCACCGCCTGACCGATCCGCGACACAAGCAGCCCAAGACCTACCTGGCCCAGGTGGAGGGCGAGCTGGATGCGAAGGCGCTGGAGGCGCTGCACCGCGGCGTCGTGTTGAACGACGGACGCACCCGGCCGGCTGCCGCCGCCCGCGTGGCAGAACCGGACTGGCTGTGGCCACGCGATCCACCAATCCGTGAGCGCCGCCACATCCCCACCAGCTGGCTGCGCCTGACCCTGCGCGAGGGTCGCAACCGCCAGGTGCGGCGCATGACCGCCGTCGTCGGCTTCCCCACGCTGCGTCTGATCCGCGTGCAGATCGGCGAGCACGCGCTGGACGGCCTGCCCCCCGGTGCCACCCGCCGACTGGCCTGA
PROTEIN sequence
Length: 178
MLIALNKPYGVLCQFTDAQGRSTLASFVSEPGVYAAGRLDRDSEGLLLLTDDGALAHRLTDPRHKQPKTYLAQVEGELDAKALEALHRGVVLNDGRTRPAAAARVAEPDWLWPRDPPIRERRHIPTSWLRLTLREGRNRQVRRMTAVVGFPTLRLIRVQIGEHALDGLPPGATRRLA*