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scnpilot_solids1_trim150_scaffold_626_15

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(13378..14241)

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 276.0
  • Bit_score: 337
  • Evalue 4.00e-90
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 276.0
  • Bit_score: 337
  • Evalue 1.80e-89
Shikimate dehydrogenase n=2 Tax=Rhodanobacter denitrificans RepID=M4NU95_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 276.0
  • Bit_score: 337
  • Evalue 1.30e-89

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
GTGGCGTCAACCAGGTTTGCCGTGTTCGGCCATCCCATCGCGCACAGCCTGTCGCCGCGTATCCATCAGGCTTTTGCGCGACAGTTTGGCATGCAGCTGGAATTCGGCACCATCGATGCGACGCCGGAAACGTTCGGGGCTGCGGTCGGGCAGTTTTTTGCCGATGGCGGTACCGGCGCCAATGTCACCGTGCCGCACAAGCACGCGGCCTATGCCCTCGCCGCCGAACGCGACGTGAGCGCCGCACGGGTCGGCGCCGCCAACGTCCTCAGCCGCCTGCCGGACGGCCGTCTGGCCGCCCACAACACCGATGGTGCCTGCCTGGTGCGGGATTTGCGCGAGCGCCATGGGCAGGTGCTGGAGGGCAGCACGGTGCTGCTGCTTGGCGCCGGCGGCGCGGCCTGGGGAGTGGCGTTCAGCCTGCTCGATGCCGGCGTGGGCGCACTGACCATTGCCAACCGCACGGCGACCACGGCCGAGCGACTGGTGCACGCGCTGGGACAGCCGGATCGGGTGCAGGCCATCCCGTTGACGCGGTTGTCCGGTGCCGGGCACTTCGATCTGATCATCAATGCCACCTCTGCAGGCCTGCTCGGACACAGCCTGGACCTGCCGTTGGCGCTCGGTGGGCCGGAGGTGTTCTGCTATGACGTCTCGTATGCGAAGGCTGCCCTGCCGTTCCTGGGCTGGGCCCGTGCAGCCGGGGCGGGGCATGCCGTGGATGGCCTGAGCATGCTGGTGGAAACGGCGGCCGACTCGTTTGCCATCTGGCATGGGCCGCACCCGGTTACCGAGCCTGTGTTCCAGCAGCTGCGCCGGCACCTGGCTGTCCAGGCCCAGGAATCCAGCGCGCTGACAGTGTAG
PROTEIN sequence
Length: 288
VASTRFAVFGHPIAHSLSPRIHQAFARQFGMQLEFGTIDATPETFGAAVGQFFADGGTGANVTVPHKHAAYALAAERDVSAARVGAANVLSRLPDGRLAAHNTDGACLVRDLRERHGQVLEGSTVLLLGAGGAAWGVAFSLLDAGVGALTIANRTATTAERLVHALGQPDRVQAIPLTRLSGAGHFDLIINATSAGLLGHSLDLPLALGGPEVFCYDVSYAKAALPFLGWARAAGAGHAVDGLSMLVETAADSFAIWHGPHPVTEPVFQQLRRHLAVQAQESSALTV*