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scnpilot_solids1_trim150_scaffold_626

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_626_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..168)
DNA (168bp) protein (56aa)
Cold shock protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB0_9GAMM
cold shock protein
Cold shock protein {ECO:0000313|EMBL:AGG90986.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_626_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

383..1201
DNA (819bp) protein (273aa)
Exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUE6_9GAMM
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL90837.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_626_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1198..1881
DNA (684bp) protein (228aa)
YecA family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUE7_9GAMM
YecA family protein {ECO:0000313|EMBL:EIL90838.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
yecA family protein
scnpilot_solids1_trim150_scaffold_626_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2254..2724
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036E83C5
Uncharacterized protein {ECO:0000313|EMBL:EIL97034.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protease subunit, stomatin/prohibitin
scnpilot_solids1_trim150_scaffold_626_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2903..3535
DNA (633bp) protein (211aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLT5_9GAMM
scnpilot_solids1_trim150_scaffold_626_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3593..4447
DNA (855bp) protein (285aa)
Chromosome partitioning protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC5_9GAMM
ATPase involved in chromosome partitioning
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_626_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4450..5316
DNA (867bp) protein (289aa)
ParB-like partition protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLT3_9GAMM
ParB-like partition protein {ECO:0000313|EMBL:EIL88174.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ParB-like partition protein
scnpilot_solids1_trim150_scaffold_626_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5465..6181
DNA (717bp) protein (239aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE2_9GAMM
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL88033.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glycosyl transferase
scnpilot_solids1_trim150_scaffold_626_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6265..6633
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUH4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90865.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_626_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6655..7587)
DNA (933bp) protein (311aa)
Putative esterase of the alpha-beta hydrolase superfamily protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE4_9GAMM
Putative esterase of the alpha-beta hydrolase superfamily protein {ECO:0000313|EMBL:EIL88035.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative esterase of the alpha-beta hydrolase superfamily
scnpilot_solids1_trim150_scaffold_626_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7775..9547
DNA (1773bp) protein (591aa)
Sodium (Na+) symporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE5_9GAMM
Sodium (Na+) symporter {ECO:0000313|EMBL:EIL88036.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sodium (Na+) symporter
scnpilot_solids1_trim150_scaffold_626_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9603..10580)
DNA (978bp) protein (326aa)
transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI00034C991E
Transcriptional regulator {ECO:0000313|EMBL:AHX15258.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_626_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10641..12683)
DNA (2043bp) protein (681aa)
Zn-dependent oligopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUE4_9GAMM
Zn-dependent oligopeptidase {ECO:0000313|EMBL:EIL90835.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent oligopeptidase
scnpilot_solids1_trim150_scaffold_626_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12805..13356
DNA (552bp) protein (184aa)
Family 3 carbonic anhydrase n=1 Tax=mine drainage metagenome RepID=T1B106_9ZZZZ
Carbonic anhydrase {ECO:0000313|EMBL:AHX15272.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
scnpilot_solids1_trim150_scaffold_626_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13378..14241)
DNA (864bp) protein (288aa)
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Shikimate dehydrogenase n=2 Tax=Rhodanobacter denitrificans RepID=M4NU95_9GAMM
scnpilot_solids1_trim150_scaffold_626_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14384..14653
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCI3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90992.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_626_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14707..16191)
DNA (1485bp) protein (495aa)
Glutathione synthase/ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC91_9GAMM
Glutathione synthase/ribosomal protein S6 modification protein {ECO:0000313|EMBL:EIL90826.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)
scnpilot_solids1_trim150_scaffold_626_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16407..16949
DNA (543bp) protein (181aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WCI1_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGG90994.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_626_19
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16998..17447
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347EB9E
ADP-ribose pyrophosphatase
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_626_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17455..18144)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90824.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_626_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18596..19282
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90822.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_626_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19284..20171
DNA (888bp) protein (296aa)
Tyrosine recombinase XerC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD0_9GAMM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tyrosine recombinase XerC subunit
scnpilot_solids1_trim150_scaffold_626_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20307..20861
DNA (555bp) protein (185aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
peptidase n=1 Tax=Dyella japonica RepID=UPI0002EB24E3 rbh
HslV component of HslUV peptidase
scnpilot_solids1_trim150_scaffold_626_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20962..22302
DNA (1341bp) protein (447aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLG9_9GAMM
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ATP-dependent protease HslVU, ATPase subunit
scnpilot_solids1_trim150_scaffold_626_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22331..22954
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLH0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88061.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_626_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23018..24178)
DNA (1161bp) protein (387aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tRNA modification GTPase MnmE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLA4_9GAMM
tRNA modification GTPase trmE
scnpilot_solids1_trim150_scaffold_626_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24430..26052)
DNA (1623bp) protein (541aa)
Membrane protein insertase YidC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBW4_9GAMM
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
preprotein translocase subunit YidC
Displaying 27 items

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