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scnpilot_solids1_trim150_scaffold_1118_7

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(4455..4964)

Top 3 Functional Annotations

Value Algorithm Source
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 169.0
  • Bit_score: 264
  • Evalue 2.50e-68
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 169.0
  • Bit_score: 264
  • Evalue 1.10e-67
Peptide deformylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK57_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 169.0
  • Bit_score: 265
  • Evalue 2.80e-68

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
TTGAGCGTGCTTTCCATCCTGGAGTTCCCCGATCCACGCCTGCGCCTGCATGCCGCGCCGGTGCAGGTCTTCGACGCGCAGCTCAAAAAGCTCGGCGCCGACATGCTGGAAACCATGTACGCCGCCAACGGCGTCGGCCTGGCCGCGATCCAGGTCAACGTGCAGCAGCGCGTCCTGGTGGCGGACATGAGCGAGGAGCGGAACCAGCCGCTGGTACTGGTCAATGCCGAGGTCGTGGAGCGCCACGGTTCGCAGGTCTACCAGGAAGGTTGCCTGTCCTTCCCTGGCATCTACGCCAACGTGACCCGCGCCCTGGGCGTCACCGTCACCGCCCTGGATCTCGACGGCAAGGCGCTGCGACTGGAACTTGAGGGGCCATTGGCGGTGTGCATCCAGCACGAGATCGACCATCTCGACGGCAAGATGTTCGTCGACTACCTGTCGCCGCTGAAACGCGCCATGTTGCTCAAGCGCCTGGACAAGCAACGCCGTCAGGCGGCGAGTGCTTGA
PROTEIN sequence
Length: 170
LSVLSILEFPDPRLRLHAAPVQVFDAQLKKLGADMLETMYAANGVGLAAIQVNVQQRVLVADMSEERNQPLVLVNAEVVERHGSQVYQEGCLSFPGIYANVTRALGVTVTALDLDGKALRLELEGPLAVCIQHEIDHLDGKMFVDYLSPLKRAMLLKRLDKQRRQAASA*