ggKbase home page

scnpilot_solids1_trim150_scaffold_2864_6

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 5009..5485

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathip similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 156.0
  • Bit_score: 234
  • Evalue 8.90e-59
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 157.0
  • Bit_score: 232
  • Evalue 7.60e-59
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWA1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 156.0
  • Bit_score: 234
  • Evalue 6.40e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGATGCGCATAGGTACGGGCTTCGACGTCCACCGCTACGGCCCCGGCACGTTCGTGATGCTGGGAGGTGTGCGCATTGCCCATGGCGCCGGGCTGATCGCGCACTCGGATGGCGACGTGGTCATCCATGCCCTGTGCGATGCCATCTTCGGTGCCTTGGCGCTCGGCGACCTGGGCGTGCATTTCCCGCCGGGCGAGGAGCGCTGGCGGCAAGCCGACAGCCGCATCTTCCTGCGCCAGGCCGGTGCCTTGATGCACGGGCACGGCCACGTACTCGGCAACGCCGACGTCACGGTCATTGCCGAGGCGCCGCGCATCGCACCCCATGTTGCGCGGATGCGCGAGATGCTGGCGCTGGACCTCGAGGTGGCCATCGAGCGCATCAGCATCAAGGCCACCACCACCGAGGGCCTGGGCTTCCTGGGCCGCGGCGAGGGCATTGCTGCCCAGGCGTGCGTGTTGCTGGAAGCGGCATGA
PROTEIN sequence
Length: 159
MMRIGTGFDVHRYGPGTFVMLGGVRIAHGAGLIAHSDGDVVIHALCDAIFGALALGDLGVHFPPGEERWRQADSRIFLRQAGALMHGHGHVLGNADVTVIAEAPRIAPHVARMREMLALDLEVAIERISIKATTTEGLGFLGRGEGIAAQACVLLEAA*