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scnpilot_solids1_trim150_scaffold_2864_7

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 5482..6531

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 331.0
  • Bit_score: 459
  • Evalue 4.90e-126
tRNA pseudouridine synthase D n=1 Tax=Dyella ginsengisoli RepID=UPI00034A72C8 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 333.0
  • Bit_score: 464
  • Evalue 1.10e-127
tRNA pseudouridine synthase, TruD family similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 330.0
  • Bit_score: 454
  • Evalue 3.50e-125

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAGCGGGCAAGCCGATGGTGAGCCCACGAGCGGCGGCAAGGCAGCGGCCGAGCTGCCGCGTGCCTACGCCCCGCCGCCATTGCGCGCGGTCTTGCGCGCCCAGCCTGAGGATTTCGTGGTCGAGGAGCTGCCTGGCTACGACGCGGATGGCAGCGGCGAGCACGTCTGGCTGTGGGTGGAGAAGCGGGGTGCCAATACCGAGTGGGTCGCCCGTCAATTGGCCGCGTTCTGCGGCATCCCAGCGGCCGATGTCGGCTATGCCGGCTTGAAGGATCGCCACGCGGTGACCCGCCAGGCCTTTTCGTTGCACCTGCCGGGCAAGGCCGGTCCGGACTGGTCGTGCTTCGCTGCAGAAGGCGTCAAGTTGCTCGAGGTCAGCCGGCATGGGCGCAAGCTCAAGCGCGGTGCCTTGCGCGGCAATCGCTTCGTGCTGCGGCTACGTGAGGTGCAGGGCGATCGCCAGCGTGCGGAGCGGGTCATGGCAGCGATTGCCGCTGGCGGCGTGCCGAATTATTTCGGCGAGCAGCGCTTCGGACTGGACGGAAGGAACCTCGAGCAGGCCAGGGCGATGTTTGCCGGTCGCCGGGTGCGGCGCGAGATGCGGTCCCTGCTGCTGTCGGCAGCGCGTTCCCAGATCTTCAACGAGGTGCTTGCCGCAAGGGTCGGGCTGGGTACCTGGAACCAGGCCATGGACGGAGACGTCTGGTCCCTGGCCGGCTCGCACTCGTGGTTTGGGCCCGAAGCCTGCACCCCGACCTTGGCGGCACGCCTGGCCGAGGGCGATATCGCCCCCTCCGGGCCGCTGTGGGGCGAAGGCGAGCCGCCCAGCACGGATGCGGCCCGTGCTTTGGAGCGCAGCATCGCCGCGGCGCATCCGAACCTGGTGGCTGGTCTCGCGGCCGCGCGCATGCGCCATGATCGCCGCGCGCTGCGCCTGCTGCCACGCGAATTGCGCTGGCACTGGCCAGCGCCGGACACGTTGGAGCTCTCCTTTGAATTGCCTGCCGGCAGCTACGCCACGGTGGTGGTACGCGAGCTGCTGCAATGA
PROTEIN sequence
Length: 350
MSGQADGEPTSGGKAAAELPRAYAPPPLRAVLRAQPEDFVVEELPGYDADGSGEHVWLWVEKRGANTEWVARQLAAFCGIPAADVGYAGLKDRHAVTRQAFSLHLPGKAGPDWSCFAAEGVKLLEVSRHGRKLKRGALRGNRFVLRLREVQGDRQRAERVMAAIAAGGVPNYFGEQRFGLDGRNLEQARAMFAGRRVRREMRSLLLSAARSQIFNEVLAARVGLGTWNQAMDGDVWSLAGSHSWFGPEACTPTLAARLAEGDIAPSGPLWGEGEPPSTDAARALERSIAAAHPNLVAGLAAARMRHDRRALRLLPRELRWHWPAPDTLELSFELPAGSYATVVVRELLQ*