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scnpilot_solids1_trim150_scaffold_1760_1

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(1..1716)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 572.0
  • Bit_score: 1000
  • Evalue 1.30e-288
Elongation factor 4 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 572.0
  • Bit_score: 1000
  • Evalue 9.00e-289
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 573.0
  • Bit_score: 995
  • Evalue 5.30e-288

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1716
ATGGAATCGATCCGCAACTTCTCCATCATTGCCCACATTGATCATGGCAAGTCCACCCTGGCGGACCGCATCATCCAGATTTGCGGAGGCTTGAGCCTGCGCGAGATGGCTGCCCAGGTGCTGGACGACAACCCGATCGAACGCGAGCGCGGCATTACCATCAAGGCGCGTGCGGTGTCGCTGCCTTACGCGGCGCGCGACGGCAAGACCTATTACCTGAATTTCATCGACACCCCGGGTCACGTGGATTTTTCCTATGAGGTAAGCCGCTCGCTGGCTGCCTGTGAGGGCGCGCTGCTGGTGGTGGACGCCGCCCAGGGGGTCGAGGCGCAATCGGTGGCCAATTGCTACACCGCGGTGGAGCAGGGTCTCGAGGTGGTGCCGGTGCTGAACAAGATCGACCTGCCCAACGCGGATGTGGACAAGGTCAAGGCCGAGATCGAGGCGGTCATCGGCGTCGACGCCAGCGAGGCGATCGCGATCAGTGCCAAGACCGGGCAGAACGTGGTCGAAGTCCTGGAGGCGATCGTCGCGCGCATCCCGCCCCCCAAGGCTGGCGACACCGACCGGCTGCAGGCGTTGATCATCGACTCCTGGTTCGACAACTACCTCGGCGTGGTTTCACTGGTGCGCATCGTGCAAGGCGAGATCCGTCCTGGCGACAGGCTGCTGGTGATGTCCACCGGGCGCACCCACGAGGTGGCCGAGGTCGGCGTGTTCACTCCCCGGCGCAAGAGGCTGGACCGCCTCGGCCCGGGTGAGGTGGGCTGGATCACTGCGGCGATCAAGGACGTGCATGGCGCACCCGTCGGGGACACCCTGACCCAGGCCGGCAAGCCTGCCGCGCAGGCCTTGCCCGGCTTCCGTACCGTGCAGCCGCGCGTATTTTCCGGCTTGTTCCCGGTCGCTTCGGACGACTACCCGGCCCTGCGCGAGGCGCTGGACAAGCTGCGCCTGAACGACGCGGCGTTGTTCTTCGAGCCGGAATCCTCCGAAGCCATGGGCTTTGGCTTCCGCTGCGGATTCCTCGGCATGCTGCACATGGAGATCGTCCAGGAGCGGCTGGAGCGCGAATACGACCTGAATCTGATCAGCACCGCCCCGACAGTCAGCTACGAGCTGCTCAAGGCCGACGGTTCCACTGAGATGCTGGACAATCCGGCCAAGCTGCCGGCGGGCTCGCAGGTCCAGGAAATCCGCGAACCGATGATCATTGCCAGCATCCTCACTCCCGCCGAATACATTGGTGGGATCATTACCCTGTGCGAGGAGAAGCGGGGTATCCAGCGTTCGATCCAGTACCTGGCCACACAAGTACAGATCAGCTACGAGCTGCCGCTGGCCGAGGTGGTGATGGATTTCTTCGACCGCCTGAAGTCAGTGTCGCGCGGCTATGCGTCGATGGATTACCAGTTCGACCGCTTCGTCGCCGGTCCGTTCGTGCGCGTCGACGTGCTGATCAATGGCGAGCGGGTGGACGCACTCAGCCTGATCATGCACCGCAGCTACGCCGACCGTCGTGGCCGCGAGCTCGTGGAGCGGATGAAGGAGCTCATCCCGCGCCAGCAGTTCGACGTGGCCATCCAGGCGGCGGTCGGCGCGCAGATCATCGCCCGATCGACGGTCAAGGCCTTGCGCAAGAACGTGCTGGCCAAATGCTACGGCGGTGACGTCAGCCGCAAGAAAAAGTTGTTGGAAAAACAAAAGGCCGGCAAG
PROTEIN sequence
Length: 572
MESIRNFSIIAHIDHGKSTLADRIIQICGGLSLREMAAQVLDDNPIERERGITIKARAVSLPYAARDGKTYYLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTAVEQGLEVVPVLNKIDLPNADVDKVKAEIEAVIGVDASEAIAISAKTGQNVVEVLEAIVARIPPPKAGDTDRLQALIIDSWFDNYLGVVSLVRIVQGEIRPGDRLLVMSTGRTHEVAEVGVFTPRRKRLDRLGPGEVGWITAAIKDVHGAPVGDTLTQAGKPAAQALPGFRTVQPRVFSGLFPVASDDYPALREALDKLRLNDAALFFEPESSEAMGFGFRCGFLGMLHMEIVQERLEREYDLNLISTAPTVSYELLKADGSTEMLDNPAKLPAGSQVQEIREPMIIASILTPAEYIGGIITLCEEKRGIQRSIQYLATQVQISYELPLAEVVMDFFDRLKSVSRGYASMDYQFDRFVAGPFVRVDVLINGERVDALSLIMHRSYADRRGRELVERMKELIPRQQFDVAIQAAVGAQIIARSTVKALRKNVLAKCYGGDVSRKKKLLEKQKAGK