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scnpilot_solids1_trim150_scaffold_1760_4

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(3622..4287)

Top 3 Functional Annotations

Value Algorithm Source
Negative regulator of sigma E activity n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 230.0
  • Bit_score: 222
  • Evalue 3.50e-55
Negative regulator of sigma E activity {ECO:0000313|EMBL:EIM01406.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 230.0
  • Bit_score: 222
  • Evalue 4.90e-55
negative regulator of sigma E activity similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 230.0
  • Bit_score: 212
  • Evalue 1.90e-52

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGAACCAGGTGCATGTGAATCAGGAAGCACGCGAAACCTTGTCGGCCGGGGTCGACGGCGAGCTTGCAGCGCCCGAATGGCGCTTTCTGCTGCGGCGTATCGACCATGACGAGGAACTGCAGCGCGTCTGGTCACGCTATCACCTGATGCGCGAAGGCCTGCGTGGGCGCATGCCGGCATTGGCCAGCGCCGGCTTTGCGGAGCGGGTTGAGGCGGCAATTGCGCGTGAGGCAGCACCGGCTGGTGTACGCCGCCGGCACTGGCTGCGCTGGTCGGCAGGTGGCGCCATCGCGGCGAGCGTGGCCGTGGTCACCTTGATGGTCGGTCACCCTTCCAACGACACCGAGCCGGTGATCGCGGCCCAGAGCGCGAGCCAGGACGCCGGCGTGCCGGTTGAGAACACCTACGCCAGCCGTGTGACCACCATGCCGTCCGCGGTGCCACCGTGGTTGAGTGGCGGCGCTGCCGGTGCGTTGAGCCAGCCCGCATCGGTCACCTTGGGCGCGCCGTTCACCGAAGTCTCCGCGCGGCCGGCGATGTCCTCGTCCGGCTACGCGCTGCCGCTCTTCCGCCAGCGCAAGCTGGACAATGGCAACGGCTCCTACCTGCTGTTGATCGACACTGCGCGTAGTGCGGGTCCGCACGACGCGGCGGTTGCCCAATAA
PROTEIN sequence
Length: 222
MNQVHVNQEARETLSAGVDGELAAPEWRFLLRRIDHDEELQRVWSRYHLMREGLRGRMPALASAGFAERVEAAIAREAAPAGVRRRHWLRWSAGGAIAASVAVVTLMVGHPSNDTEPVIAAQSASQDAGVPVENTYASRVTTMPSAVPPWLSGGAAGALSQPASVTLGAPFTEVSARPAMSSSGYALPLFRQRKLDNGNGSYLLLIDTARSAGPHDAAVAQ*