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scnpilot_solids1_trim150_scaffold_4050_6

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 5153..5671

Top 3 Functional Annotations

Value Algorithm Source
geranylgeranyl pyrophosphate synthase (EC:2.5.1.10) similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 177.0
  • Bit_score: 248
  • Evalue 1.90e-63
Farnesyl-diphosphate synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZE9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 172.0
  • Bit_score: 253
  • Evalue 1.90e-64
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:EIL92590.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 172.0
  • Bit_score: 253
  • Evalue 2.60e-64

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGTCCGCACCGAGCGTGCGCTGGAACGTAGCCTGCCGCCCAACGAAAAATCGCCCGCGGCCCTGCACCAGGCGATGCGCTACGCGGTGCTCGGCGGCGGCAAGCGCCTGCGCCCGCTGCTCGTCTACGCCACCGCCGACGCGCTGGGCCACGATGCGCCCGGCCTCGATGCGCTGGCCTGTGCGGTGGAGCTGATCCATTCCTACTCGCTGGTGCACGACGATCTGCCGGCCATGGACAACGATGCGTTGCGCCGTGGTCGACCCACCTGCCACGTCATGTTCGGCGAGGCCATGGCCATCCTGGCCGGTGATGCGCTGCAGGCACTTGCGTTTGAGCTGCTGGCCAGGGGGGATATCGCAACCGGCACCGCGCCCGGGTTGACCCTGCGTATGCTTGACGTGCTTGGCCGCGCCTGTGGCGCGGGCGGCATGGCCGGCGGCCAGGCCCTGGACCTCGCCGCGGTGGGCCAGAAGCTGACCCTGGCCGAGCTCGAGCACATAAGACCGGTGCGCTGA
PROTEIN sequence
Length: 173
MVRTERALERSLPPNEKSPAALHQAMRYAVLGGGKRLRPLLVYATADALGHDAPGLDALACAVELIHSYSLVHDDLPAMDNDALRRGRPTCHVMFGEAMAILAGDALQALAFELLARGDIATGTAPGLTLRMLDVLGRACGAGGMAGGQALDLAAVGQKLTLAELEHIRPVR*