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scnpilot_solids1_trim150_scaffold_4050_7

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 5722..6003

Top 3 Functional Annotations

Value Algorithm Source
geranylgeranyl pyrophosphate synthase (EC:2.5.1.10) similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 91.0
  • Bit_score: 126
  • Evalue 5.90e-27
Geranyltranstransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 91.0
  • Bit_score: 132
  • Evalue 2.60e-28
Geranyltranstransferase {ECO:0000313|EMBL:EIL94643.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 91.0
  • Bit_score: 132
  • Evalue 3.70e-28

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
GTGCGGGAGGCGCTGGCACACTACGCCCACGCACTCGGTTTGGCCTTCCAGATCCGTGACGACATCCTCGACGTGGATGGCGAATCGACGGTGCTGGGCAAGACCGCCGGCAAGGACGCCGCAGCCGACAAGCCGACGTTCCCTTCGGTCATCGGCATGCAGGCCACGGTGGCGCGGCTGGAAGAACTGACCGCCGCCGCGCTGGACGCGATCGCACCGCTGGGCGAGCATGGCGTGCTGTTGCGCGAGCTGGCGCTGTACGCCGCAAACCGCAGCCACTGA
PROTEIN sequence
Length: 94
VREALAHYAHALGLAFQIRDDILDVDGESTVLGKTAGKDAAADKPTFPSVIGMQATVARLEELTAAALDAIAPLGEHGVLLRELALYAANRSH*