ggKbase home page

scnpilot_solids1_trim150_scaffold_11571_1

Organism: SCNPILOT_SOLID_1_TRIM150_Lysobacter_69_7

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(1..606)

Top 3 Functional Annotations

Value Algorithm Source
pilus biogenesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EAC5F9 similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 203.0
  • Bit_score: 193
  • Evalue 2.10e-46
Chemotaxis protein {ECO:0000313|EMBL:KGM53463.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 202.0
  • Bit_score: 203
  • Evalue 2.80e-49
methyl-accepting chemotaxis sensory transducer; K02660 twitching motility protein PilJ similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 189.0
  • Bit_score: 186
  • Evalue 1.00e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAGCAATTTGATGGATTCCGCCGCCGGCAAGGGCCGCAATCTCAGCACCAACTTCTGGATCTGGCTGCTGATCGGCTCGCTGGTGGTGTTCGCCGGCAATACCCTGTACGCCACCACCAAGGCTTCGCGCCTCGGCGGTGCCAGTTCCGCGGCATCGCGCCTGCAGCTGAACTCGCAGCGCCTCGCCAACCAGGGCCGGGAAGCGATCGACGGCAACGTGCAGGCGTTCGAAGCGTTCAAGGCGACCAAGGAAGAAATCGACGGCGACATCAAGTGGCTGAACGACCGCTTCGGCGACGCCGCCGACGTGGCGGCCCCGATCCGCACCGTCACCGAAACCTGGAACCCGCTGACCAAGCGCGCCGAGGAAGTGCTGGGCTCGCAACAGGCGGTGCTGGCGCTGGCCGGCCGCGCCGACAGCTTCACCAACAAGGTGCCGCAGCTGCAGGCGCAGCTGTACGAGGTGCTGCGCGGCCTGGTCTCCGGCGGTGCCAATTCCGCGCAGGTGAGCGCGGCGCTGCAGCAGGCCAACATCAGTTCGCGCATGGCGCAGCGCATCGCCGAGCTGCGCGCCGGCGGCGACGGTGCCCAGGTGGCGGCGAAC
PROTEIN sequence
Length: 202
MSNLMDSAAGKGRNLSTNFWIWLLIGSLVVFAGNTLYATTKASRLGGASSAASRLQLNSQRLANQGREAIDGNVQAFEAFKATKEEIDGDIKWLNDRFGDAADVAAPIRTVTETWNPLTKRAEEVLGSQQAVLALAGRADSFTNKVPQLQAQLYEVLRGLVSGGANSAQVSAALQQANISSRMAQRIAELRAGGDGAQVAAN