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scnpilot_solids1_trim150_scaffold_11571_2

Organism: SCNPILOT_SOLID_1_TRIM150_Lysobacter_69_7

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(640..1416)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pili signal transduction protein PilI {ECO:0000313|EMBL:KGQ18709.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 191.0
  • Bit_score: 293
  • Evalue 2.60e-76
Chemotaxis signal transduction protein id=2704647 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 256
  • Evalue 2.50e-65
Chemotaxis signal transduction protein; K02659 twitching motility protein PilI similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 174.0
  • Bit_score: 245
  • Evalue 1.80e-62

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGGCCAAGCGCGGCAAGCACAAGCACAAGTTCCGCCCGCAGCAGGCCGCAGCGGTGCCGGCGGCCACCTCGCTGGCCGCAGCCGCAGCGGTGGATGACGACGAGGACGCAGGCGACGACGCGGAAGAGGAGCGGTCCGAGCCGGTCGTCTCCGCGGGTGCGCACGAGGATCTAGATGCAGCCGGGCCGGTGCCCGTGGGCGCTCCCGCTGCCGCCCCGGAATGGGTACAGCCTGCCAGCGGCGAGAGGCGTTCGCCGTTCCTGGTGCTGGCCGATTACGAACAGCGCAGCCTTGCCCACGTTGCCGGCCTGCCGGAACAGCTGGATGCCCCCGGCCTGTGGCGCGGCGTGGCCTATCGCGTCGGAGCGCACCGGCTGGCTTCCGGCTTCGATGAAGTGGTGGAAATCCTGCCGATGCCGTCGCTGACCCATGTCCCCGGCGCGCAGCCGTGGATGCTGGGCGTGGCCAATATCCGTGGCGCACTGCTGCCGGTGGTCGATCTCAAGCAGTTCCTCGACGGCGAGCGCACCGTGCTGCACGAACGCCAGCGCGTGCTGGTGGTGCGCCAGCCCGGCGGCGATGTCGCCGTCACCATCGACGAGCTCTACGGCCAGCGCAGTTTCGTCGAAGAGCAGGGCATCGATGCCGACGCGGTGGCGGATGGTCGCTACGCCCATTTCGTCGATCGCGCCTACCGCATGAATGGACAGGACTGGGGCGTGTTCAGCCTCGAGCGCCTCGCCCGCACCCCCGAATTCCGACAAGCCGCCGCTTAA
PROTEIN sequence
Length: 259
MAKRGKHKHKFRPQQAAAVPAATSLAAAAAVDDDEDAGDDAEEERSEPVVSAGAHEDLDAAGPVPVGAPAAAPEWVQPASGERRSPFLVLADYEQRSLAHVAGLPEQLDAPGLWRGVAYRVGAHRLASGFDEVVEILPMPSLTHVPGAQPWMLGVANIRGALLPVVDLKQFLDGERTVLHERQRVLVVRQPGGDVAVTIDELYGQRSFVEEQGIDADAVADGRYAHFVDRAYRMNGQDWGVFSLERLARTPEFRQAAA*