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scnpilot_solids1_trim150_scaffold_2291

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2291_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1524
DNA (1524bp) protein (508aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEX9_9SPHN rbh
scnpilot_solids1_trim150_scaffold_2291_2
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1543..1812)
DNA (270bp) protein (90aa)
Addiction module toxin, RelE/StbE family n=3 Tax=Mobiluncus mulieris RepID=C2KRH2_9ACTO
addiction module toxin, RelE/StbE family
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_solids1_trim150_scaffold_2291_3
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1796..2014)
DNA (219bp) protein (73aa)
CopG family transcripitonal regulator n=1 Tax=Thioalkalivibrio sp. AKL6 RepID=UPI00036A3C81
RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_solids1_trim150_scaffold_2291_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2086..2505)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE24_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_2291_5
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2533..3066)
DNA (534bp) protein (178aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=LSPA_SPHAL
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_2291_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3063..5972)
DNA (2910bp) protein (970aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] rbh
Isoleucine--tRNA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEX3_9SPHN rbh
scnpilot_solids1_trim150_scaffold_2291_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6207..6497)
DNA (291bp) protein (97aa)
Excinuclease ABC subunit C n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU41_9SPHN
Excinuclease ABC subunit C {ECO:0000313|EMBL:ENY82000.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
excinuclease ABC subunit C; K07461 putative endonuclease
scnpilot_solids1_trim150_scaffold_2291_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6545..7474)
DNA (930bp) protein (310aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] rbh
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
FMN adenylyltransferase / riboflavin kinase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQK5_SPHAL rbh
scnpilot_solids1_trim150_scaffold_2291_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7590..8357)
DNA (768bp) protein (256aa)
Peptidase M19 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W375_9SPHN rbh
Peptidase M19 {ECO:0000313|EMBL:ENY81997.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
peptidase M19 rbh
scnpilot_solids1_trim150_scaffold_2291_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8569..8844
DNA (276bp) protein (92aa)
beta-lactamase n=1 Tax=Afipia birgiae RepID=UPI0002F0E8BE
Uncharacterized protein {ECO:0000313|EMBL:EKS36095.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying 10 items

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