ggKbase home page

scnpilot_solids1_trim150_scaffold_6951

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_6951_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..630)
DNA (630bp) protein (210aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Transcription termination factor Rho n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG63_9SPHN
rho; transcription termination factor Rho; K03628 transcription termination factor Rho
scnpilot_solids1_trim150_scaffold_6951_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1007..1456)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4G9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82437.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K08973 putative membrane protein
scnpilot_solids1_trim150_scaffold_6951_3
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1461..2489)
DNA (1029bp) protein (343aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hemE; uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] rbh
Uroporphyrinogen decarboxylase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=DCUP_SPHAL rbh
scnpilot_solids1_trim150_scaffold_6951_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2825..3643
DNA (819bp) protein (273aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVX9_9SPHN rbh
hypothetical protein; K09773 hypothetical protein rbh
Displaying 4 items

View Taxonomy