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scnpilot_solids1_trim150_scaffold_3321

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3321_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..711
DNA (711bp) protein (237aa)
Membrane protein insertase YidC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0D8_9SPHN
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
putative inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC
scnpilot_solids1_trim150_scaffold_3321_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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708..1349
DNA (642bp) protein (214aa)
Probable GTP-binding protein EngB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBW4_9SPHN rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein rbh
scnpilot_solids1_trim150_scaffold_3321_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1474..2145
DNA (672bp) protein (224aa)
glutathione S-transferase-like protein; K04097 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GN67_SPHAL rbh
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ABF51728.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_3321_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2170..2637)
DNA (468bp) protein (156aa)
Cupin 2, conserved barrel n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRJ1_SPHAL rbh
Cupin {ECO:0000313|EMBL:KGB58872.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
cupin rbh
scnpilot_solids1_trim150_scaffold_3321_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2758..3891
DNA (1134bp) protein (378aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] rbh
Succinyl-diaminopimelate desuccinylase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEX0_9SPHN rbh
scnpilot_solids1_trim150_scaffold_3321_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3894..4469)
DNA (576bp) protein (192aa)
Smr protein/MutS2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVG9_9SPHN
Smr protein/MutS2 {ECO:0000313|EMBL:KGB52593.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
Smr protein/MutS2
scnpilot_solids1_trim150_scaffold_3321_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4475..5890)
DNA (1416bp) protein (472aa)
MltA protein; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] rbh
MltA protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUZ0_9SPHN rbh
MltA protein {ECO:0000313|EMBL:ENY82260.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_3321_8
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5896..6603)
DNA (708bp) protein (236aa)
Import inner membrane translocase subunit Tim44 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFR2_9SPHN
import inner membrane translocase subunit Tim44 rbh
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
Displaying 8 items

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