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scnpilot_solids1_trim150_scaffold_5830

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5830_1
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..89)
DNA (87bp) protein (29aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase; K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQS1_SPHAL
scnpilot_solids1_trim150_scaffold_5830_2
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(155..988)
DNA (834bp) protein (278aa)
Type 11 methyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6M8_9SPHN rbh
type 11 methyltransferase rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_5830_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1017..1253
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXL8_9SPHN
Putative membrane protein {ECO:0000313|EMBL:AJA10580.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
scnpilot_solids1_trim150_scaffold_5830_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1511..3061)
DNA (1551bp) protein (517aa)
Type II secretion system protein E n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY69_9SPHN rbh
Type II secretion system protein E {ECO:0000313|EMBL:KGB55644.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
type II secretion system protein E; K02283 pilus assembly protein CpaF rbh
scnpilot_solids1_trim150_scaffold_5830_5
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3684..3941)
DNA (258bp) protein (86aa)
atpC; F0F1 ATP synthase subunit epsilon; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
H+-transporting two-sector ATPase, delta/epsilon subunit n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQS4_SPHAL
H+-transporting two-sector ATPase, delta/epsilon subunit {ECO:0000313|EMBL:ABF53998.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_5830_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4050..4295)
DNA (246bp) protein (82aa)
atpD; ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
ATP synthase subunit beta n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR45_9SPHN
Displaying 6 items

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