ggKbase home page

scnpilot_solids1_trim150_scaffold_26554_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 324..1208

Top 3 Functional Annotations

Value Algorithm Source
Putative PAS/PAC sensor protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU52_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 292.0
  • Bit_score: 339
  • Evalue 4.40e-90
  • rbh
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:KGB54209.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 296.0
  • Bit_score: 353
  • Evalue 3.20e-94
putative PAS/PAC sensor protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 292.0
  • Bit_score: 339
  • Evalue 1.40e-90
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGAGACGGTCAGGGAACCGCAGCGCGTGCCCGCTGCCGAATTCATTCGCGGTTTCGCGAACTGGCGCCTGCAGGCGTCGCGCAAGCCGGTCATGGTCACGCATCACGGCAAGGATGCGCATGTGCTGATCTCGCTCGCCGACTATCGCCGCCTCGACGGCAAGGGGGAGGCGGAAGGGCGCGACGCGTTGGCGGCATCGCAGGCGGCGCTGATCGAGGCGATCCGTGACGCGGTGATCCTCGTCGACCGCACAGGCCGCGTCGCGGGGGTCAATCCGGCGGCCGCCGATCTGCTCGAACGGGCGGCGGCCGCGCTGATCGGCCGGCCCTTGCCCGACGTCCTGCCGGGGTTCGCGCGCTCGGTGCTGTTCGCGCATTTCCTGCGGATGCTCGACCATCGCGAGCGTTTCTCCGGCGAGGTGCCGGGGCTGATCGAGCCGCAGCGCTGGCTGCGTGTCGACCTCCTCCCGCTGCCGATCGGCGGGGCGATGGTGCTGCGCGACATCAGCGACGCGTGGGGGACGCGCGCCGAACAGGACGCCCGGCGCGCGCTCGCCGACGCGGTCGAGATCGACGGGACGATCGGGGTCGCTCGCGTGTCGGTGCGCGAGGCGATCGAGGCGGCCAACCCGGCGCTCGCCGCCATGATCGGCGCAAAACAGTCCGCAATCCCCCACCTCCGCTTCTCAGCGTTGCTCGCGGCCGGGCAGCGGCACGCTTTCATCGAGGCTTTCGAAGGCCTGTTCCGTAAAGGCGACCCCGTTCGCATCGCGTCGGAACTGGTGACTCGTGGCGGCAGTGTTGTGTCAGTCACGCTCGCCATGGTCGAGCGGCGATCGGCCTATGCGAGCGACGGCGCGATGATCCTGGCGGTGCGCCGCTAG
PROTEIN sequence
Length: 295
METVREPQRVPAAEFIRGFANWRLQASRKPVMVTHHGKDAHVLISLADYRRLDGKGEAEGRDALAASQAALIEAIRDAVILVDRTGRVAGVNPAAADLLERAAAALIGRPLPDVLPGFARSVLFAHFLRMLDHRERFSGEVPGLIEPQRWLRVDLLPLPIGGAMVLRDISDAWGTRAEQDARRALADAVEIDGTIGVARVSVREAIEAANPALAAMIGAKQSAIPHLRFSALLAAGQRHAFIEAFEGLFRKGDPVRIASELVTRGGSVVSVTLAMVERRSAYASDGAMILAVRR*