ggKbase home page

scnpilot_solids1_trim150_scaffold_26554_3

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(1205..1438)

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease Z (EC:3.-.-.-); K00784 ribonuclease Z [EC:3.1.26.11] similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 75.0
  • Bit_score: 78
  • Evalue 9.00e-13
Ribonuclease Z n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VXX9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 77.0
  • Bit_score: 117
  • Evalue 5.60e-24
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 78.0
  • Bit_score: 130
  • Evalue 1.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATCCTCGACTATCATGCCAGCCCCGCGCAGGCGGCCGACAGTGCACGCCGCGCTGGCGTCCGGATGCTCGTCCTCAGCCACATCGTCCCGCCCCTGCCATCGCGCTATTTCAACGCGGCGCTGCTCGACGGCGCCGACAGTCGCTTCGACGGCCCGATCATCGTCGGCGAGGACGGGCAATATTTCTCCCTGCCCGCCGGCAGCCGGGCGATCGACTGGGGAAGCTGGTTCTAG
PROTEIN sequence
Length: 78
ILDYHASPAQAADSARRAGVRMLVLSHIVPPLPSRYFNAALLDGADSRFDGPIIVGEDGQYFSLPAGSRAIDWGSWF*