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SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

In projects: SCNPILOT_SOLID_1_TRIM150

Consensus taxonomy: Flavobacteriales  →  Flavobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Curated version: solids_Flavobacteriales_1

Properties

Avg. coverage: 3.98 Longest contig: 8.96 Kbp Bin length: 1.35 Mbp GC content: 39.55 %
Contigs count: 814 Features count: 1745 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38
Displaying items 251-300 of 814 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids1_trim150_scaffold_41560
Species: Chryseobacterium taiwanense (50%)
2 1037 bp 42.04 2.31 86.50
scnpilot_solids1_trim150_scaffold_29467
Species: Flavobacterium sp. KMS (50%)
2 1335 bp 35.06 3.93 86.52
scnpilot_solids1_trim150_scaffold_37976
Species: Flavobacterium sp. EM1321 (50%)
2 1109 bp 48.42 3.52 86.56
scnpilot_solids1_trim150_scaffold_19512
Species: Chryseobacterium solincola (50%)
2 1791 bp 47.63 3.18 86.60
scnpilot_solids1_trim150_scaffold_36974
Species: R_Fluviicola_43_260 (50%)
2 1132 bp 40.19 1.59 86.66
scnpilot_solids1_trim150_scaffold_12974 3 2396 bp 34.47 3.51 86.69
scnpilot_solids1_trim150_scaffold_26281
Species: Chryseobacterium luteum (50%)
2 1450 bp 36.90 3.10 86.69
scnpilot_solids1_trim150_scaffold_35619
Species: Elizabethkingia meningoseptica (50%)
2 1162 bp 34.60 4.39 86.75
scnpilot_solids1_trim150_scaffold_36228
Species: Nonlabens ulvanivorans (50%)
2 1148 bp 40.85 3.92 86.76
scnpilot_solids1_trim150_scaffold_38415
Species: R_Fluviicola_43_260 (100%)
1 1100 bp 42.00 3.27 87.00
scnpilot_solids1_trim150_scaffold_27273
Species: Flavobacterium sp. AED (50%)
2 1411 bp 37.56 3.40 87.17
scnpilot_solids1_trim150_scaffold_18441
Species: Elizabethkingia meningoseptica (50%)
2 1862 bp 40.55 3.87 87.33
scnpilot_solids1_trim150_scaffold_26666
Species: Chryseobacterium sp. JM1 (50%)
2 1435 bp 38.54 3.24 87.39
scnpilot_solids1_trim150_scaffold_9545
Order: Flavobacteriales (66.67%)
3 2986 bp 32.42 4.47 87.41
scnpilot_solids1_trim150_scaffold_24431
Order: Flavobacteriales (66.67%)
3 1526 bp 42.46 3.15 87.48
scnpilot_solids1_trim150_scaffold_11832
Species: Flavobacterium sp. F52 (50%)
2 2560 bp 38.09 3.75 87.54
scnpilot_solids1_trim150_scaffold_29736
Species: Fluviicola taffensis (100%)
2 1326 bp 37.78 2.49 87.56
scnpilot_solids1_trim150_scaffold_21981
Species: R_Fluviicola_43_260 (50%)
2 1648 bp 37.68 3.55 87.56
scnpilot_solids1_trim150_scaffold_31740
Species: Formosa sp. AK20 (50%)
2 1264 bp 37.90 4.75 87.58
scnpilot_solids1_trim150_scaffold_21010
Species: R_Fluviicola_43_260 (100%)
1 1699 bp 42.67 3.80 87.58
scnpilot_solids1_trim150_scaffold_12303
Species: Fluviicola taffensis (66.67%)
3 3349 bp 39.33 2.91 87.61
scnpilot_solids1_trim150_scaffold_24844
Species: R_Fluviicola_43_260 (50%)
2 1509 bp 40.76 4.08 87.67
scnpilot_solids1_trim150_scaffold_30805
Species: R_Fluviicola_43_260 (50%)
2 1293 bp 42.23 3.83 87.70
scnpilot_solids1_trim150_scaffold_17777
Species: Kordia algicida (50%)
2 1911 bp 44.37 3.45 87.76
scnpilot_solids1_trim150_scaffold_42016
Species: CG_Flavo_01 (50%)
2 1029 bp 38.78 2.92 87.76
scnpilot_solids1_trim150_scaffold_37428
Order: Flavobacteriales (66.67%)
3 1121 bp 35.41 3.48 87.78
scnpilot_solids1_trim150_scaffold_30755
Species: Aequorivita sublithincola (50%)
2 1295 bp 39.69 3.01 87.80
scnpilot_solids1_trim150_scaffold_33745
Species: Chryseobacterium antarcticum (50%)
2 1209 bp 39.70 2.23 87.84
scnpilot_solids1_trim150_scaffold_41325
Species: R_Fluviicola_43_260 (50%)
2 1041 bp 36.79 3.46 87.90
scnpilot_solids1_trim150_scaffold_43076
Species: Flavobacterium hibernum (50%)
2 1010 bp 39.11 3.27 87.92
scnpilot_solids1_trim150_scaffold_28692
Species: Flavobacterium indicum (50%)
2 1359 bp 35.47 2.87 88.08
scnpilot_solids1_trim150_scaffold_35822
Species: Fluviicola taffensis (66.67%)
3 1158 bp 40.07 3.89 88.08
scnpilot_solids1_trim150_scaffold_35690
Order: Flavobacteriales (66.67%)
3 1161 bp 41.60 3.62 88.11
scnpilot_solids1_trim150_scaffold_35701
Species: Chryseobacterium soli (50%)
2 1161 bp 44.70 3.62 88.11
scnpilot_solids1_trim150_scaffold_27567
Species: R_Fluviicola_43_260 (50%)
2 1399 bp 39.03 2.47 88.13
scnpilot_solids1_trim150_scaffold_42485
Species: Fluviicola taffensis (100%)
1 1021 bp 32.42 4.11 88.15
scnpilot_solids1_trim150_scaffold_28395
Species: Elizabethkingia meningoseptica (100%)
1 1369 bp 42.66 2.19 88.31
scnpilot_solids1_trim150_scaffold_26358
Order: Flavobacteriales (66.67%)
3 1447 bp 38.77 3.32 88.32
scnpilot_solids1_trim150_scaffold_30761
Species: Elizabethkingia meningoseptica (50%)
2 1294 bp 40.96 4.87 88.33
scnpilot_solids1_trim150_scaffold_12396
Species: Elizabethkingia anophelis (50%)
2 2479 bp 40.10 5.14 88.34
scnpilot_solids1_trim150_scaffold_26223
Species: Fluviicola taffensis (100%)
1 1452 bp 42.08 3.10 88.43
scnpilot_solids1_trim150_scaffold_22607
Order: Flavobacteriales (66.67%)
3 1615 bp 37.15 4.46 88.61
scnpilot_solids1_trim150_scaffold_15259
Species: Cellulophaga geojensis (100%)
1 2133 bp 31.27 4.15 88.61
scnpilot_solids1_trim150_scaffold_29679
Species: BJP_IG2102_Flavobacteriales_34_12 (50%)
2 1327 bp 39.04 4.63 88.62
scnpilot_solids1_trim150_scaffold_16319
Species: Flavobacterium subsaxonicum (50%)
2 2031 bp 46.77 3.55 88.63
scnpilot_solids1_trim150_scaffold_35572
Species: Galbibacter marinus (50%)
2 1164 bp 34.79 3.87 88.66
scnpilot_solids1_trim150_scaffold_6455
Species: uncultured Flavobacteriia bacterium (66.67%)
3 3981 bp 36.32 4.71 88.70
scnpilot_solids1_trim150_scaffold_42843
Species: Polaribacter sp. Hel1_85 (100%)
1 1014 bp 31.07 3.25 88.76
scnpilot_solids1_trim150_scaffold_17100
Order: Flavobacteriales (66.67%)
3 1966 bp 40.44 2.75 88.81
scnpilot_solids1_trim150_scaffold_18146
Species: Chryseobacterium solincola (50%)
2 1883 bp 40.04 3.03 88.90
Displaying items 251-300 of 814 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.