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scnpilot_solids1_trim150_scaffold_2581

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2581_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..373)
DNA (372bp) protein (124aa)
Integral membrane protein linked to a cation pump-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVD4_9SPHN
Integral membrane protein linked to a cation pump-like protein {ECO:0000313|EMBL:ENY82214.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
integral membrane protein linked to a cation pump-like protein
scnpilot_solids1_trim150_scaffold_2581_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370..1842)
DNA (1473bp) protein (491aa)
4Fe-4S ferredoxin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WET8_9SPHN rbh
4Fe-4S ferredoxin {ECO:0000313|EMBL:ENY82213.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
4Fe-4S ferredoxin rbh
scnpilot_solids1_trim150_scaffold_2581_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1829..2770)
DNA (942bp) protein (314aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3X8_9SPHN rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cytochrome c oxidase, cbb3-type subunit III; K00406 cytochrome c oxidase cbb3-type subunit III
scnpilot_solids1_trim150_scaffold_2581_4
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2763..2921)
DNA (159bp) protein (53aa)
Cbb3-type cytochrome oxidase component n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSI5_SPHAL
cbb3-type cytochrome oxidase subunit; K00407 cytochrome c oxidase cbb3-type subunit IV
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_2581_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2918..3691)
DNA (774bp) protein (258aa)
Cbb3-type cytochrome c oxidase subunit II n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUV4_9SPHN rbh
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:ENY82210.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II
scnpilot_solids1_trim150_scaffold_2581_6
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3705..5363)
DNA (1659bp) protein (553aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] rbh
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSI3_SPHAL rbh
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:ABF53389.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_2581_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5535..6206
DNA (672bp) protein (224aa)
OmpW protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WET4_9SPHN rbh
OmpW protein {ECO:0000313|EMBL:ENY82208.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
OmpW protein; K07275 outer membrane protein rbh
scnpilot_solids1_trim150_scaffold_2581_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6274..6966)
DNA (693bp) protein (231aa)
Crp/FNR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3X7_9SPHN rbh
Crp/FNR family transcriptional regulator {ECO:0000313|EMBL:ENY82207.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Crp/FNR family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein rbh
scnpilot_solids1_trim150_scaffold_2581_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7676..8056
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUV0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82205.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2581_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8062..8421
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVC7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82204.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2581_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8452..8946
DNA (495bp) protein (165aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WET0_9SPHN rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:ENY82203.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MarR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2581_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9001..9747)
DNA (747bp) protein (249aa)
RNA polymerase subunit sigma 28 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3X2_9SPHN rbh
RNA polymerase subunit sigma 28 {ECO:0000313|EMBL:ENY82202.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
RNA polymerase subunit sigma 28; K02405 RNA polymerase sigma factor for flagellar operon FliA rbh
scnpilot_solids1_trim150_scaffold_2581_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9737..11857)
DNA (2121bp) protein (707aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFM3_9SPHN rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ENY82201.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
flhA; flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA rbh
scnpilot_solids1_trim150_scaffold_2581_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11854..12357)
DNA (504bp) protein (168aa)
Lytic transglycosylase, catalytic n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUU2_9SPHN
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ENY82200.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
lytic transglycosylase, catalytic
scnpilot_solids1_trim150_scaffold_2581_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12306..12569)
DNA (264bp) protein (88aa)
Lytic transglycosylase, catalytic n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUU2_9SPHN
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ENY82200.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
lytic transglycosylase, catalytic
scnpilot_solids1_trim150_scaffold_2581_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12648..12953)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82199.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2581_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12953..13258)
DNA (306bp) protein (102aa)
Putative anti-sigma-28 factor, FlgM n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WES7_9SPHN
Putative anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:ENY82198.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_2581_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13428..13601)
DNA (174bp) protein (58aa)
Flagellar protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3X0_9SPHN
Flagellar protein {ECO:0000313|EMBL:ENY82197.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
flagellar protein; K02386 flagella basal body P-ring formation protein FlgA
Displaying 18 items

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