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scnpilot_solids1_trim150_scaffold_4178

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4178_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..525
DNA (525bp) protein (175aa)
50S ribosomal protein L2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVG7_9SPHN
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
scnpilot_solids1_trim150_scaffold_4178_2
Sphingopyxis soli, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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529..804
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=4 Tax=Sphingopyxis RepID=I0IW71_9SPHN
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=592051 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis soli.;"
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
scnpilot_solids1_trim150_scaffold_4178_3
Sphingopyxis terrae, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


804..1184
DNA (381bp) protein (127aa)
50S ribosomal protein L22 n=2 Tax=Sphingopyxis RepID=I0IWA8_9SPHN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=33052 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis terrae.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
scnpilot_solids1_trim150_scaffold_4178_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1215..1829
DNA (615bp) protein (205aa)
30S ribosomal protein S3 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFF4_9SPHN
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
scnpilot_solids1_trim150_scaffold_4178_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1841..2272
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW10_9SPHN
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
scnpilot_solids1_trim150_scaffold_4178_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2278..2481
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=2 Tax=Sphingopyxis RepID=I0IW91_9SPHN
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
scnpilot_solids1_trim150_scaffold_4178_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2492..2758
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=2 Tax=Sphingopyxis RepID=I0IWB0_9SPHN
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
scnpilot_solids1_trim150_scaffold_4178_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2827..3195
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4K7_9SPHN
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
scnpilot_solids1_trim150_scaffold_4178_9
Sphingopyxis terrae, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3198..3518
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=2 Tax=Sphingopyxis RepID=I0IWB1_9SPHN
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=33052 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis terrae.;"
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
scnpilot_solids1_trim150_scaffold_4178_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3511..4089
DNA (579bp) protein (193aa)
50S ribosomal protein L5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW15_9SPHN rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 rbh
scnpilot_solids1_trim150_scaffold_4178_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4142..4447
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=3 Tax=Sphingopyxis RepID=I0IW94_9SPHN
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
scnpilot_solids1_trim150_scaffold_4178_12
Sphingopyxis terrae, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4460..4864
DNA (405bp) protein (135aa)
30S ribosomal protein S8 n=2 Tax=Sphingopyxis RepID=I0IW95_9SPHN
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=33052 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis terrae.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
scnpilot_solids1_trim150_scaffold_4178_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4864..5397
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4L3_9SPHN rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 rbh
scnpilot_solids1_trim150_scaffold_4178_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5401..5754
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=2 Tax=Sphingopyxis RepID=I0IWB4_9SPHN
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
scnpilot_solids1_trim150_scaffold_4178_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5757..6470
DNA (714bp) protein (238aa)
30S ribosomal protein S5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW21_9SPHN rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 rbh
scnpilot_solids1_trim150_scaffold_4178_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6475..6630
DNA (156bp) protein (52aa)
50S ribosomal protein L30 n=2 Tax=Sphingopyxis RepID=I0IW97_9SPHN
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
Displaying 16 items

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