ggKbase home page

scnpilot_solids1_trim150_scaffold_3346

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3346_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1227
DNA (1227bp) protein (409aa)
Type II and III secretion system protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1M4_9SPHN rbh
Type II and III secretion system protein {ECO:0000313|EMBL:ENY81377.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
type II and III secretion system protein; K02280 pilus assembly protein CpaC rbh
scnpilot_solids1_trim150_scaffold_3346_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1251..1901
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCA0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81378.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K02281 pilus assembly protein CpaD rbh
scnpilot_solids1_trim150_scaffold_3346_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1898..3166
DNA (1269bp) protein (423aa)
Response regulator receiver protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USS9_9SPHN rbh
Response regulator receiver protein {ECO:0000313|EMBL:ENY81379.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
response regulator receiver protein; K02282 pilus assembly protein CpaE rbh
scnpilot_solids1_trim150_scaffold_3346_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3236..4207
DNA (972bp) protein (324aa)
Type II secretion system protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USD4_9SPHN rbh
Type II secretion system protein {ECO:0000313|EMBL:ENY81380.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
type II secretion system protein; K12510 tight adherence protein B rbh
scnpilot_solids1_trim150_scaffold_3346_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4221..5267
DNA (1047bp) protein (349aa)
Type II secretion system protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WD14_9SPHN rbh
Type II secretion system protein {ECO:0000313|EMBL:ENY81381.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
type II secretion system protein; K12511 tight adherence protein C rbh
scnpilot_solids1_trim150_scaffold_3346_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5341..6342)
DNA (1002bp) protein (334aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1N0_9SPHN rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ENY81382.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
fumarylacetoacetate (FAA) hydrolase rbh
scnpilot_solids1_trim150_scaffold_3346_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6924..7523
DNA (600bp) protein (200aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
Sensor signal transduction histidine kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UST4_9SPHN rbh
Displaying 7 items

View Taxonomy