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scnpilot_solids1_trim150_scaffold_2222

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2222_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1302
DNA (1302bp) protein (434aa)
ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L4_9GAMM
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:EIL95805.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_2222_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1640..2035
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98314.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2222_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2124..2957
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95803.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2222_4
unknown

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3018..3230
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2222_5
unknown

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comp(3163..3831)
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2222_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4139..4705
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037922C9
Uncharacterized protein {ECO:0000313|EMBL:AHG92491.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2222_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4841..5704)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344F121 rbh
Endonuclease {ECO:0000313|EMBL:AHX14743.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
metal-dependent hydrolase
scnpilot_solids1_trim150_scaffold_2222_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5773..6690)
DNA (918bp) protein (306aa)
Putative metal-dependent hydrolase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJV1_TERRK rbh
Cyclase {ECO:0000313|EMBL:GAN45762.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative metal-dependent hydrolase rbh
scnpilot_solids1_trim150_scaffold_2222_9
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6796..7677)
DNA (882bp) protein (294aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BKL5_9XANT rbh
Beta-lactamase {ECO:0000313|EMBL:KGM57554.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2222_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7710..8027)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382787F
Uncharacterized protein {ECO:0000313|EMBL:GAN45771.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ycdJ; arylesterase
scnpilot_solids1_trim150_scaffold_2222_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8110..9252)
DNA (1143bp) protein (381aa)
Na+ efflux pump ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X3_9GAMM
ABC transporter permease {ECO:0000313|EMBL:KGI78949.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC-type Na+ efflux pump, permease component
scnpilot_solids1_trim150_scaffold_2222_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9249..9983)
DNA (735bp) protein (245aa)
Sodium ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH99_9GAMM
ABC-type Na+ transport system, ATPase component
Sodium ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIL98840.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_2222_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10158..11789)
DNA (1632bp) protein (544aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL07_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL87898.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids1_trim150_scaffold_2222_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11786..12010)
DNA (225bp) protein (75aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NCK0_9GAMM
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:GAN45592.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_2222_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12000..12590)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003816A64
Membrane protein {ECO:0000313|EMBL:AHX15583.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2222_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12762..14177
DNA (1416bp) protein (472aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX01_9GAMM
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG87361.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2222_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14174..15256
DNA (1083bp) protein (361aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM
RND family efflux transporter, MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL94712.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_2222_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15354..17972
DNA (2619bp) protein (873aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC98_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL97089.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cation/multidrug efflux pump
Displaying 18 items

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