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scnpilot_solids1_trim150_scaffold_2320

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2320_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..490)
DNA (489bp) protein (163aa)
Bacteriocin resistance protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TLK0_STEMA
Bacteriocin resistance protein {ECO:0000313|EMBL:EMI50057.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
peptidase C39 bacteriocin processing
scnpilot_solids1_trim150_scaffold_2320_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(593..1756)
DNA (1164bp) protein (388aa)
adhesin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F90F8 rbh
Adhesin {ECO:0000313|EMBL:AHY58244.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Large exoproteins involved in heme utilization or adhesion rbh
scnpilot_solids1_trim150_scaffold_2320_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1783..2418)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F66A9D
Uncharacterized protein {ECO:0000313|EMBL:KGI76648.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2320_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2430..2960)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CNH9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KGI76647.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2320_5
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3260..4378)
DNA (1119bp) protein (373aa)
cystathionine gamma-synthase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B36B01
Uncharacterized protein {ECO:0000313|EMBL:KFN42469.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
scnpilot_solids1_trim150_scaffold_2320_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4466..4888
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Dyella ginsengisoli RepID=UPI000349F38D
Glyoxalase {ECO:0000313|EMBL:GAN44915.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lactoylglutathione lyase-like lyase
scnpilot_solids1_trim150_scaffold_2320_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4896..6266)
DNA (1371bp) protein (457aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Glutamate-1-semialdehyde-2,1-aminomutase n=1 Tax=mine drainage metagenome RepID=T0ZVV8_9ZZZZ
glutamate-1-semialdehyde-2,1-aminomutase
scnpilot_solids1_trim150_scaffold_2320_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6263..6919)
DNA (657bp) protein (219aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonic
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000304B5C8
thiamine-phosphate pyrophosphorylase
scnpilot_solids1_trim150_scaffold_2320_9
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7012..7209
DNA (198bp) protein (66aa)
rubredoxin n=1 Tax=Dyella japonica RepID=UPI0002FFFBA0
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
Rubredoxin-type Fe(Cys)4 protein
scnpilot_solids1_trim150_scaffold_2320_10
unknown

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7315..7575
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2320_11
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7479..7949)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC04_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV29350.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
Displaying 11 items

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