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scnpilot_solids1_trim150_scaffold_2538

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2538_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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45..3005
DNA (2961bp) protein (987aa)
Transposase Tn5044 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L7T5_STEMA rbh
Transposase Tn5044 {ECO:0000313|EMBL:EQM88072.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
transposase rbh
scnpilot_solids1_trim150_scaffold_2538_2
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3194..3613
DNA (420bp) protein (140aa)
phrB; deoxyribodipyrimidine photo lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
FAD binding domain of DNA photolyase n=1 Tax=Burkholderia multivorans CF2 RepID=J4JKA3_9BURK
FAD binding domain of DNA photolyase {ECO:0000313|EMBL:EJO57346.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CF2.;"
scnpilot_solids1_trim150_scaffold_2538_3
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3614..4891)
DNA (1278bp) protein (426aa)
PAS/PAC/GGDEF-domain containing protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K298_AZOSB rbh
PAS/PAC/GGDEF-domain-containing protein rbh
PAS/PAC/GGDEF-domain containing protein {ECO:0000313|EMBL:CAL92953.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scnpilot_solids1_trim150_scaffold_2538_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4888..5652)
DNA (765bp) protein (255aa)
EAL domain-containing protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5ZC70_9PSED rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AHY60801.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
EAL domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_2538_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5732..6406)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF51_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98092.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2538_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6569..7294)
DNA (726bp) protein (242aa)
Dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF53_9GAMM
Dehydrogenase {ECO:0000313|EMBL:EIL98094.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase
scnpilot_solids1_trim150_scaffold_2538_7

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7321..8013
DNA (693bp) protein (231aa)
Lipocalin family protein n=1 Tax=mine drainage metagenome RepID=T0ZU49_9ZZZZ
Lipocalin family protein {ECO:0000313|EMBL:EQD33425.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
bacterial lipocalin
scnpilot_solids1_trim150_scaffold_2538_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8010..8144
DNA (135bp) protein (45aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003699FDD
Uncharacterized protein {ECO:0000313|EMBL:AHY58902.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
Displaying 8 items

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