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scnpilot_solids1_trim150_scaffold_201

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_201_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..241
DNA (240bp) protein (80aa)
Putative glycerol-1-phosphate dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XFE1_VARPD
putative glycerol-1-phosphate dehydrogenase
Putative glycerol-1-phosphate dehydrogenase {ECO:0000313|EMBL:AGU51231.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids1_trim150_scaffold_201_2
unknown

Not on your lists

280..690
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E7C70
scnpilot_solids1_trim150_scaffold_201_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

844..1377
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037047E4
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ATP synthase F1 subcomplex delta subunit
scnpilot_solids1_trim150_scaffold_201_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1439..2986
DNA (1548bp) protein (516aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
F0F1 ATP synthase subunit alpha n=1 Tax=Dyella japonica RepID=UPI00031D5669
proton translocating ATP synthase, F1 alpha subunit
scnpilot_solids1_trim150_scaffold_201_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2993..3913
DNA (921bp) protein (307aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
F0F1 ATP synthase subunit gamma n=1 Tax=Dyella ginsengisoli RepID=UPI00034D60C7
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids1_trim150_scaffold_201_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4105..5544
DNA (1440bp) protein (480aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ATP synthase subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLT0_9GAMM
ATP synthase, F1 beta subunit
scnpilot_solids1_trim150_scaffold_201_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5731..6153
DNA (423bp) protein (141aa)
ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
F0F1 ATP synthase subunit epsilon n=1 Tax=Rudaea cellulosilytica RepID=UPI0003706FD6
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
scnpilot_solids1_trim150_scaffold_201_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7140..8534
DNA (1395bp) protein (465aa)
glmU; UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase n=1 Tax=Dyella japonica RepID=UPI0002D3065E
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids1_trim150_scaffold_201_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8571..9557)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034902CC
Alpha/beta hydrolase {ECO:0000313|EMBL:GAN45091.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids1_trim150_scaffold_201_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9563..11455)
DNA (1893bp) protein (631aa)
Aminopeptidase N n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR62_9GAMM
Aminopeptidase {ECO:0000313|EMBL:KGI79102.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aminopeptidase N
scnpilot_solids1_trim150_scaffold_201_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11587..12270
DNA (684bp) protein (228aa)
gst8; glutathione S-transferase (EC:2.5.1.18); K04097 glutathione S-transferase [EC:2.5.1.18]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A20BD rbh
Glutathione S-transferase {ECO:0000313|EMBL:AIF46176.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids1_trim150_scaffold_201_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12419..13060)
DNA (642bp) protein (214aa)
glutathione-s-transferase theta, gst, putative (EC:2.5.1.18)
Glutathione S-transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI93_9GAMM rbh
Glutathione S-transferase {ECO:0000313|EMBL:EIL86934.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_201_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13244..14206)
DNA (963bp) protein (321aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Proline iminopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI94_9GAMM rbh
proline iminopeptidase
scnpilot_solids1_trim150_scaffold_201_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14548..15309)
DNA (762bp) protein (254aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE n=1 Tax=mine drainage metagenome RepID=T1AT59_9ZZZZ rbh
ubiquinone/menaquinone biosynthesis methyltransferase
scnpilot_solids1_trim150_scaffold_201_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15546..17360)
DNA (1815bp) protein (605aa)
Zinc protease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF32_9GAMM
Zinc protease {ECO:0000313|EMBL:EIL98073.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative Zn-dependent peptidase
scnpilot_solids1_trim150_scaffold_201_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17357..18394)
DNA (1038bp) protein (346aa)
Putative Zn-dependent peptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NI73_9GAMM
Peptidase M16 {ECO:0000313|EMBL:GAN45084.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative Zn-dependent peptidase
scnpilot_solids1_trim150_scaffold_201_17

Not on your lists

18521..19219
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=mine drainage metagenome RepID=T1AKP7_9ZZZZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EQD42590.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_201_18
unknown

Not on your lists

19402..19497
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_201_19
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19606..20070
DNA (465bp) protein (155aa)
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKP0_9GAMM
putative rRNA methylase SpoU family
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_201_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20075..20653)
DNA (579bp) protein (193aa)
Membrane protein {ECO:0000313|EMBL:GAN45318.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Integral membrane protein id=2826597 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_solids1_trim150_scaffold_201_21
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20967..21740
DNA (774bp) protein (258aa)
sterol-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034655B4
Sterol-binding protein {ECO:0000313|EMBL:GAN45081.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_201_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21737..23584
DNA (1848bp) protein (616aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Putative ubiquinone biosynthesis protein UbiB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF36_9GAMM
scnpilot_solids1_trim150_scaffold_201_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23718..24461)
DNA (744bp) protein (248aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF95_9GAMM
scnpilot_solids1_trim150_scaffold_201_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24595..25323
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWK7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91598.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_201_25
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

25896..26528
DNA (633bp) protein (211aa)
id=1911522 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
scnpilot_solids1_trim150_scaffold_201_26
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27031..29439)
DNA (2409bp) protein (803aa)
Phosphomannomutase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKW5_9GAMM
Phosphoglucomutase {ECO:0000313|EMBL:GAN45186.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
phosphomannomutase
scnpilot_solids1_trim150_scaffold_201_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29441..29908)
DNA (468bp) protein (156aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; Deoxyuridine 5'-triphosphate nucleotidohydrolase; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ28_9GAMM
scnpilot_solids1_trim150_scaffold_201_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29905..30579)
DNA (675bp) protein (225aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW6_9GAMM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EIL88076.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_201_29
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30569..31144)
DNA (576bp) protein (192aa)
coaBC; coA biosynthesis protein CoABC (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E73C8
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:KGQ20135.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_201_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31294..31959
DNA (666bp) protein (222aa)
DNA repair protein radc n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKW2_9GAMM
DNA repair protein radc {ECO:0000313|EMBL:EIL87853.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA repair protein
Displaying items 1-30 of 95 in total

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