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scnpilot_solids1_trim150_scaffold_583

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_583_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..640)
DNA (639bp) protein (213aa)
magnesium-transporting ATPase n=1 Tax=Dyella japonica RepID=UPI0002D5FC6C
Magnesium ABC transporter ATPase {ECO:0000313|EMBL:AHX14872.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
magnesium-translocating P-type ATPase
scnpilot_solids1_trim150_scaffold_583_2
unknown

Not on your lists

comp(910..1041)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_583_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1457..2062
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W503_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94544.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K07152
scnpilot_solids1_trim150_scaffold_583_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2059..2514
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Burkholderia thailandensis RepID=N0AJT0_BURTH
Uncharacterized protein {ECO:0000313|EMBL:KGI77845.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_583_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2463..3467)
DNA (1005bp) protein (335aa)
Putative membrane protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WXF8_9BURK rbh
Membrane protein {ECO:0000313|EMBL:KGI77844.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_583_6
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3475..5667)
DNA (2193bp) protein (731aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003714FF6
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
scnpilot_solids1_trim150_scaffold_583_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5721..6641)
DNA (921bp) protein (307aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Protoheme IX farnesyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ81_9GAMM
protoheme IX farnesyltransferase
scnpilot_solids1_trim150_scaffold_583_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6699..7910)
DNA (1212bp) protein (404aa)
Cytochrome oxidase assembly protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W308_9GAMM
Cytochrome oxidase assembly protein {ECO:0000313|EMBL:KGI76815.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
uncharacterized protein required for cytochrome oxidase assembly
scnpilot_solids1_trim150_scaffold_583_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7910..8458)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DA0323
Uncharacterized protein {ECO:0000313|EMBL:KGI76682.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_583_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8465..9211)
DNA (747bp) protein (249aa)
Protein, SURF1 family n=2 Tax=mine drainage metagenome RepID=T1A8K9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGI76683.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_583_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9278..9502
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D5AD99
Uncharacterized protein {ECO:0000313|EMBL:AIF46672.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_583_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9541..11358)
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003785D91 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF46045.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
TPR repeat-containing protein
scnpilot_solids1_trim150_scaffold_583_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11493..12368)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003702BF3
MFS transporter {ECO:0000313|EMBL:KGI76685.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
heme/copper-type cytochrome/quinol oxidase, subunit 3
scnpilot_solids1_trim150_scaffold_583_14
unknown

Not on your lists

comp(12413..12580)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_583_15
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12754..14364)
DNA (1611bp) protein (537aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter denitrificans RepID=I4WHY2_9GAMM
Cytochrome oxidase subunit I {ECO:0000313|EMBL:KGI76686.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cytochrome c oxidase, subunit I
scnpilot_solids1_trim150_scaffold_583_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14416..15396)
DNA (981bp) protein (327aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cytochrome C oxidase, subunit II protein (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II n=1 Tax=mine drainage metagenome RepID=T1B824_9ZZZZ rbh
scnpilot_solids1_trim150_scaffold_583_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15503..16075)
DNA (573bp) protein (191aa)
Integral membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ89_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN45546.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
integral membrane protein
scnpilot_solids1_trim150_scaffold_583_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16150..19314
DNA (3165bp) protein (1055aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AGG87449.1}; EC=1.5.1.12 {ECO:0000313|EMBL:AGG87449.1};; EC=1.5.99.8 {ECO:0000313|EMBL:AGG87449.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHY5_9GAMM
scnpilot_solids1_trim150_scaffold_583_19
unknown

Not on your lists

19311..19931
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00036E6286
scnpilot_solids1_trim150_scaffold_583_20

Not on your lists

comp(20026..21387)
DNA (1362bp) protein (454aa)
Membrane protein involved in aromatic hydrocarbon degradation n=2 Tax=mine drainage metagenome RepID=T1CD28_9ZZZZ rbh
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EQD64585.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ompP1; outer membrane protein; K06076 long-chain fatty acid transport protein
scnpilot_solids1_trim150_scaffold_583_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21491..25054
DNA (3564bp) protein (1188aa)
Ankyrin repeat-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRB0_9GAMM
Ankyrin repeat-containing protein {ECO:0000313|EMBL:EIL89751.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ankyrin repeat-containing protein
scnpilot_solids1_trim150_scaffold_583_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25242..27062)
DNA (1821bp) protein (607aa)
potassium transporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034B60F8
Potassium transporter {ECO:0000313|EMBL:GAN45934.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Kef-type potassium/proton antiporter, CPA2 family
scnpilot_solids1_trim150_scaffold_583_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27186..27650)
DNA (465bp) protein (155aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC98_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL97089.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cation/multidrug efflux pump
Displaying 23 items

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