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scnpilot_solids1_trim150_scaffold_644

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_644_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..341
DNA (339bp) protein (113aa)
Probable GTP-binding protein EngB n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKZ5_9GAMM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
cell division checkpoint GTPase YihA
scnpilot_solids1_trim150_scaffold_644_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

512..1876
DNA (1365bp) protein (455aa)
glutamate--cysteine ligase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B49EF7 rbh
Glutamate--cysteine ligase {ECO:0000313|EMBL:GAN45514.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glutamate--cysteine ligase, plant type
scnpilot_solids1_trim150_scaffold_644_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1946..3121)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHD8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98879.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_644_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3230..4147)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE06_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97697.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_644_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4185..5213)
DNA (1029bp) protein (343aa)
Asparaginase n=1 Tax=Rhodanobacter denitrificans RepID=M4NNS6_9GAMM
asparaginase
Asparaginase {ECO:0000313|EMBL:AGG89331.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_644_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5370..7811
DNA (2442bp) protein (814aa)
Alpha-mannosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V2_9GAMM
Alpha-mannosidase {ECO:0000313|EMBL:EIL95543.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_644_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7921..10110)
DNA (2190bp) protein (730aa)
Peptidyl-dipeptidase Dcp n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKZ0_9GAMM
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EIL87881.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Zn-dependent oligopeptidase
scnpilot_solids1_trim150_scaffold_644_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10142..10492)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHE0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45885.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_644_9
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10669..14187
DNA (3519bp) protein (1173aa)
peptidase S41; K08676 tricorn protease [EC:3.4.21.-] rbh
Peptidase S41 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXM4_HALO1 rbh
Peptidase S41 {ECO:0000313|EMBL:ACY17779.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
scnpilot_solids1_trim150_scaffold_644_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14364..15173)
DNA (810bp) protein (270aa)
Methyltransferase type 11 n=1 Tax=mine drainage metagenome RepID=T1DHG5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:GAN45884.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
probable glycosyl transferase
scnpilot_solids1_trim150_scaffold_644_11

Not on your lists

comp(15170..15868)
DNA (699bp) protein (233aa)
Dithiobiotin synthetase n=1 Tax=mine drainage metagenome RepID=T1CE61_9ZZZZ
Dithiobiotin synthetase {ECO:0000313|EMBL:EQD64239.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
dethiobiotin synthase
scnpilot_solids1_trim150_scaffold_644_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15865..16578)
DNA (714bp) protein (238aa)
Transglutaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W329_9GAMM
Transglutaminase {ECO:0000313|EMBL:EIL93870.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transglutaminase-like protein
scnpilot_solids1_trim150_scaffold_644_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16723..17211
DNA (489bp) protein (163aa)
GAF sensor protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKZ4_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:GAN45887.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
GAF domain-containing protein; K07170 GAF domain-containing protein
scnpilot_solids1_trim150_scaffold_644_14
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17217..18260)
DNA (1044bp) protein (348aa)
Peptidase n=1 Tax=Lysobacter sp. ATCC 53042 RepID=F8TUB8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR68255.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
peptidase M23
scnpilot_solids1_trim150_scaffold_644_15
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(18383..19201)
DNA (819bp) protein (273aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100); K00034 glucose 1-dehydrogenase [EC:1.1.1.47]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J2M3_NOSP7
Sugar dehydrogenase {ECO:0000313|EMBL:KER10308.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
scnpilot_solids1_trim150_scaffold_644_16
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19380..20810)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GXM4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ04612.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_644_17
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20820..22262)
DNA (1443bp) protein (481aa)
glycoside hydrolase family protein; K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37]
Glycoside hydrolase, family 39 n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FT29_ACICJ
Glycoside hydrolase, family 39 {ECO:0000313|EMBL:ABQ28761.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
scnpilot_solids1_trim150_scaffold_644_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22318..25494)
DNA (3177bp) protein (1059aa)
Putative NdvB protein {ECO:0000313|EMBL:CDW92922.1}; EC=2.4.1.- {ECO:0000313|EMBL:CDW92922.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Cellobiose phosphorylase (EC:2.4.1.20)
Putative Cellobiose phosphorylase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQS5_THIA3
Displaying 18 items

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