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scnpilot_solids1_trim150_scaffold_787

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_787_1
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..290
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A3EB1
Uncharacterized protein {ECO:0000313|EMBL:KFL35563.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
moaC; molybdenum cofactor biosynthesis protein MoaC; K03637 molybdenum cofactor biosynthesis protein C
scnpilot_solids1_trim150_scaffold_787_2
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

287..526
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035DB0AB
Molybdopterin-converting factor chain 1 {ECO:0000313|EMBL:ENZ93654.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;"
moaD; molybdopterin converting factor subunit 1; K03636 molybdopterin synthase sulfur carrier subunit
scnpilot_solids1_trim150_scaffold_787_3
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

528..944
DNA (417bp) protein (139aa)
moaE; molybdopterin-converting factor chain 2; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
molybdopterin-converting factor chain 2 n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000369AA23
Molybdopterin-converting factor chain 2 {ECO:0000313|EMBL:AJC45662.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
scnpilot_solids1_trim150_scaffold_787_trna_2
unknown

Not on your lists

comp(1228..1317)
DNA (90bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_787_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1450..3108
DNA (1659bp) protein (553aa)
DNA polymerase III subunit gamma/tau n=1 Tax=Dyella ginsengisoli RepID=UPI00034C7145
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:AHX12750.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
DNA polymerase III, subunit gamma/tau
scnpilot_solids1_trim150_scaffold_787_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3105..3428
DNA (324bp) protein (108aa)
Nucleoid-associated protein UU5_10788 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7X8_9GAMM
Nucleoid-associated protein HY57_10805 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
DNA-binding protein, YbaB/EbfC family
scnpilot_solids1_trim150_scaffold_787_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3433..4035
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNZ8_9GAMM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA replication and repair protein RecR
scnpilot_solids1_trim150_scaffold_787_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4039..4473
DNA (435bp) protein (145aa)
Acetyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7X6_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL95567.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_787_8
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4470..4814
DNA (345bp) protein (115aa)
HIT family hydrolase n=1 Tax=Rudaea cellulosilytica RepID=UPI000363B196
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AFC85816.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
scnpilot_solids1_trim150_scaffold_787_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5559..7550)
DNA (1992bp) protein (664aa)
Transglutaminase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLP6_9GAMM
Transglutaminase {ECO:0000313|EMBL:AHX12756.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
transglutaminase-like enzyme, predicted cysteine protease
scnpilot_solids1_trim150_scaffold_787_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7547..8509)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKI0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45937.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_787_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8514..9470)
DNA (957bp) protein (319aa)
MoxR-like ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKH9_9GAMM
ATPase AAA {ECO:0000313|EMBL:KGI78399.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
MoxR-like ATPase
scnpilot_solids1_trim150_scaffold_787_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9545..10129)
DNA (585bp) protein (195aa)
Maf-like protein UU5_10733 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7W7_9GAMM
Maf-like protein UU5_10733 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
MAF protein
scnpilot_solids1_trim150_scaffold_787_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10126..10587)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKH7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI77999.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_787_14
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10738..11238
DNA (501bp) protein (167aa)
Putative metal-binding protein, possibly nucleic-acid binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLQ1_9GAMM
putative metal-binding protein, possibly nucleic-acid binding protein
Characterized ACR protein {ECO:0000313|EMBL:KGM57535.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_787_15

Not on your lists


11267..11461
DNA (195bp) protein (65aa)
Ribosomal protein L32p n=1 Tax=mine drainage metagenome RepID=T1B7P0_9ZZZZ
Ribosomal protein L32p {ECO:0000313|EMBL:EQD65917.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LSU ribosomal protein L32P
scnpilot_solids1_trim150_scaffold_787_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11559..12527
DNA (969bp) protein (323aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKH4_9GAMM
3-oxoacyl-(acyl-carrier-protein) synthase III
scnpilot_solids1_trim150_scaffold_787_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12720..13691
DNA (972bp) protein (324aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
malonyl CoA-ACP transacylase n=1 Tax=Dyella japonica RepID=UPI0003628801
malonyl CoA-acyl carrier protein transacylase
scnpilot_solids1_trim150_scaffold_787_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13706..13888
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U0S5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE49772.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_787_19

Not on your lists

13908..14651
DNA (744bp) protein (248aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-ketoacyl-ACP reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CC40B
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EQD63173.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_solids1_trim150_scaffold_787_20
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15029..15268
DNA (240bp) protein (80aa)
acyl carrier protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A77E0
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
acyl carrier protein
scnpilot_solids1_trim150_scaffold_787_21
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15539..16777
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Dyella japonica RepID=UPI0002EC8AC5
scnpilot_solids1_trim150_scaffold_787_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16788..18200
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP13_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88954.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
anthranilate/para-aminobenzoate synthase component I
scnpilot_solids1_trim150_scaffold_787_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18209..19021
DNA (813bp) protein (271aa)
aminodeoxychorismate lyase apoprotein (EC:4.1.3.38)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D8169A
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AIF47735.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids1_trim150_scaffold_787_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19018..20067
DNA (1050bp) protein (350aa)
Aminodeoxychorismate lyase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP15_9GAMM
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EIL88956.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_787_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20064..20696
DNA (633bp) protein (211aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
thymidylate kinase (EC:2.7.4.9)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031CDBBC
scnpilot_solids1_trim150_scaffold_787_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20693..21691
DNA (999bp) protein (333aa)
DNA polymerase III subunit delta'''' n=1 Tax=Dyella ginsengisoli RepID=UPI0003456A57
DNA polymerase III subunit delta {ECO:0000313|EMBL:AHX12772.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
DNA polymerase III, delta'' subunit
scnpilot_solids1_trim150_scaffold_787_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21750..22775
DNA (1026bp) protein (342aa)
Putative LmbE-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP18_9GAMM
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:AHX12773.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative LmbE-like protein
scnpilot_solids1_trim150_scaffold_787_28
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22830..23189
DNA (360bp) protein (120aa)
Type IV pilus assembly PilZ n=5 Tax=Stenotrophomonas maltophilia RepID=G0K0C4_STEMA
type IV pilus assembly PilZ; K02676 type IV pilus assembly protein PilZ
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_787_trna_1
unknown

Not on your lists

comp(23343..23416)
DNA (74bp)
transferRNA Pro
Displaying items 1-30 of 33 in total

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