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scnpilot_solids1_trim150_scaffold_1012

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1012_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..992)
DNA (990bp) protein (330aa)
ABC transporter involved in gliding motility, auxiliary component n=1 Tax=Rhodanobacter sp. 115 RepID=I4W506_9GAMM
ABC transporter {ECO:0000313|EMBL:KGI78375.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
scnpilot_solids1_trim150_scaffold_1012_2
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(989..1762)
DNA (774bp) protein (258aa)
ABC transporter permease n=1 Tax=Rudaea cellulosilytica RepID=UPI000361B6CE
ABC transporter permease; K01992 ABC-2 type transport system permease protein
Putative ABC transporter, permease protein {ECO:0000313|EMBL:AAU92171.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_solids1_trim150_scaffold_1012_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2018..2956)
DNA (939bp) protein (313aa)
ABC transporter ATP-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034ADDBA
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIM03013.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids1_trim150_scaffold_1012_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3226..4605)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A65DF
Polyketide cyclase {ECO:0000313|EMBL:GAN45792.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1012_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4873..5514)
DNA (642bp) protein (214aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter sp. 115 RepID=I4W750_9GAMM
LuxR family transcriptional regulator {ECO:0000313|EMBL:GAN45793.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_solids1_trim150_scaffold_1012_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5594..6835)
DNA (1242bp) protein (414aa)
Two-component system sensor protein n=1 Tax=mine drainage metagenome RepID=T1B3I8_9ZZZZ
Histidine kinase {ECO:0000313|EMBL:GAN45794.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_1012_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7050..7667
DNA (618bp) protein (206aa)
GCN5 family acetyltransferase n=1 Tax=Dyella japonica RepID=UPI0003198731
GCN5 family acetyltransferase {ECO:0000313|EMBL:GAN45795.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative acetyltransferase, GNAT superfamily
scnpilot_solids1_trim150_scaffold_1012_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7664..8458
DNA (795bp) protein (265aa)
septation inhibitor protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345E519
septum site-determining protein MinC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1012_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8549..9361
DNA (813bp) protein (271aa)
Site-determining protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAV8_9GAMM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
septum site-determining protein MinD
scnpilot_solids1_trim150_scaffold_1012_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9373..9648
DNA (276bp) protein (92aa)
cell division topological specificity factor n=1 Tax=Dyella japonica RepID=UPI0002DAAB5A
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cell division topological specificity factor MinE
scnpilot_solids1_trim150_scaffold_1012_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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9741..10250
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1CFI6_9ZZZZ
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1012_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10407..10799
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B680F
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
CrcB protein
scnpilot_solids1_trim150_scaffold_1012_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10796..11140
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D31B9
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
scnpilot_solids1_trim150_scaffold_1012_14
RLO_PLX_64_10, Bacteria

Not on your lists

11137..12333
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D313_METSW
major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
scnpilot_solids1_trim150_scaffold_1012_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12333..13499
DNA (1167bp) protein (389aa)
Cyclopropane fatty acyl phospholipid synthase {ECO:0000313|EMBL:EIL96606.1}; EC=2.1.1.79 {ECO:0000313|EMBL:EIL96606.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Cyclopropane fatty acyl phospholipid synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAW5_9GAMM
methyltransferase, cyclopropane fatty acid synthase
scnpilot_solids1_trim150_scaffold_1012_16
unknown

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comp(13554..13916)
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1012_17
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14416..17298)
DNA (2883bp) protein (961aa)
Putative TonB-dependent transporter n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M725_9XANT
TonB-dependent receptor {ECO:0000313|EMBL:KGK65322.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_1012_18
unknown

Not on your lists

comp(17312..17617)
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying 18 items

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