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scnpilot_solids1_trim150_scaffold_1456

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1456_1
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3..629
DNA (627bp) protein (209aa)
ABC transporter permease n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003092F65
ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A; K02066 putative ABC transport system permease protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1456_2
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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632..1456
DNA (825bp) protein (275aa)
ABC transporter ATP-binding protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVQ3_PSEUP
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1456_3
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1470..2396
DNA (927bp) protein (309aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJA2_STEMA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM53805.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C; K02067 putative ABC transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_1456_4
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2393..3049
DNA (657bp) protein (219aa)
Putative secreted protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZIZ9_XANCT
ABC transporter {ECO:0000313|EMBL:KGM53806.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1456_5
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3128..4804
DNA (1677bp) protein (559aa)
Electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) {ECO:0000313|EMBL:CEH47679.1}; EC=1.5.5.1 {ECO:0000313|EMBL:CEH47679.1};; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
putative electron transfer flavoprotein-ubiquinone oxidoreductase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] rbh
Putative electron transfer flavoprotein-ubiquinone oxidoreductase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URA1_PSEUP rbh
scnpilot_solids1_trim150_scaffold_1456_6
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4860..5486)
DNA (627bp) protein (209aa)
IpsJ protein; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] rbh
IpsJ protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVP8_PSEUP rbh
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KGM53809.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_1456_7
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5488..6207)
DNA (720bp) protein (240aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KGM53810.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Probable succinyl-coa:3-ketoacid-coenzyme a transferase subunit a protein id=2794536 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
scnpilot_solids1_trim150_scaffold_1456_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6376..7122
DNA (747bp) protein (249aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVN9_PSEUP rbh
EtfB protein {ECO:0000313|EMBL:KGM55124.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit rbh
scnpilot_solids1_trim150_scaffold_1456_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7216..8157
DNA (942bp) protein (314aa)
electron transfer flavoprotein subunit beta n=1 Tax=Pseudomonas geniculata RepID=UPI00029A64DA rbh
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:CCP09624.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit rbh
scnpilot_solids1_trim150_scaffold_1456_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8227..9174
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UQD1_STEMA rbh
Glycosyltransferase {ECO:0000313|EMBL:AHY60401.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
b-glycosyltransferase
scnpilot_solids1_trim150_scaffold_1456_11
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9178..9945
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VIN8_STEMA
GCN5 family acetyltransferase {ECO:0000313|EMBL:EYR69208.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1456_12
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9973..10323
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L143_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED38475.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1456_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10336..11469
DNA (1134bp) protein (378aa)
TDP-4-oxo-6-deoxy-D-glucose aminotransferase n=1 Tax=Pseudomonas geniculata RepID=UPI00029A98E9 rbh
TDP-4-oxo-6-deoxy-D-glucose aminotransferase {ECO:0000313|EMBL:AHY60404.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
TDP-4-oxo-6-deoxy-D-glucose transaminase; K02805 lipopolysaccharide biosynthesis protein
scnpilot_solids1_trim150_scaffold_1456_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11473..12999
DNA (1527bp) protein (509aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCU2_NIAKG
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEW03546.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 14 items

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