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scnpilot_solids1_trim150_scaffold_1589

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1589_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1472)
DNA (1470bp) protein (490aa)
Catecholate siderophore receptor Fiu n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN33_9GAMM
Catecholate siderophore receptor Fiu {ECO:0000313|EMBL:EIL88624.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
catecholate siderophore receptor Fiu; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_1589_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1812..3965)
DNA (2154bp) protein (718aa)
putative metalloendopeptidase; K07386 putative endopeptidase [EC:3.4.24.-]
Putative metalloendopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN32_9GAMM rbh
Putative metalloendopeptidase {ECO:0000313|EMBL:EIL88623.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_1589_3
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4157..5575
DNA (1419bp) protein (473aa)
beta-lactamase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B59D34 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN41426.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein
scnpilot_solids1_trim150_scaffold_1589_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5565..5804)
DNA (240bp) protein (80aa)
translation initiation factor IF-1 n=1 Tax=Dyella japonica RepID=UPI0002FDA47B
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
scnpilot_solids1_trim150_scaffold_1589_5

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comp(5880..6188)
DNA (309bp) protein (103aa)
Putative polyhydroxyalkanoic acid system protein n=2 Tax=mine drainage metagenome RepID=T0ZK36_9ZZZZ
Putative polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:EQD30175.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_solids1_trim150_scaffold_1589_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6222..6971
DNA (750bp) protein (250aa)
FHA domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEV6_9GAMM
FHA domain-containing protein {ECO:0000313|EMBL:EIL97997.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
FHA domain-containing protein
scnpilot_solids1_trim150_scaffold_1589_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7137..8222
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VZ24_9GAMM
scnpilot_solids1_trim150_scaffold_1589_8
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8215..9354
DNA (1140bp) protein (380aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
histidinol-phosphate aminotransferase (EC:2.6.1.-); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
histidinol-phosphate aminotransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B475DD
scnpilot_solids1_trim150_scaffold_1589_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9351..10661
DNA (1311bp) protein (437aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Dyella japonica RepID=UPI0002D43239
scnpilot_solids1_trim150_scaffold_1589_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10692..11375
DNA (684bp) protein (228aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Cytidylate kinase n=2 Tax=mine drainage metagenome RepID=T0ZBV9_9ZZZZ
cytidylate kinase
scnpilot_solids1_trim150_scaffold_1589_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11513..12196
DNA (684bp) protein (228aa)
30S ribosomal protein S1 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B2D25
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
Displaying 11 items

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